Stappia sp.

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Stappia

Description

Stappia sp. is a Gram-negative bacterium characterized by its rod shape. This species possesses a single replicon, which is significant in understanding its genomic organization and replication processes. The accession number for Stappia sp. is PBLF00000000.1, which provides a reference for researchers seeking to access its genomic data for further study. The classification of Stappia sp. as Gram-negative indicates that it has a thin peptidoglycan layer surrounded by an outer membrane, which is a defining feature of this group. This structural characteristic can influence the bacterium's susceptibility to antibiotics and its interaction with the environment. The ecological role of Stappia sp. is not explicitly detailed in the provided traits; however, Gram-negative bacteria are often found in diverse habitats and can play critical roles in nutrient cycling and interactions within microbial communities. Their ability to adapt to various environments may contribute to their survival and ecological significance. In conclusion, the characteristics of Stappia sp., including its Gram-negative nature and rod shape, suggest that it may play an important role in its ecosystem, although further research would be necessary to elucidate its specific biological and ecological functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusStappia
SpeciesStappia sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Stappia sp. isolate SP245 MHASMcontig_2899486, whole genome

Gene Summary

Adenine Count

801528 bp

Thymine Count

822423 bp

Guanine Count

1579826 bp

Cytosine Count

1537462 bp

Genome Length

4741554 bp

Protein-coding Genes

4135 genes

Non-Coding Genes

192 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cyclaseCMN87_03395Not AvailablePositive748829 - 74965329016.5
hypothetical proteinCMN87_03400Not AvailableNegative749708 - 75017517101.5
oxidoreductaseCMN87_03405Not AvailableNegative750172 - 75150946814.1
type i glutamate--ammonia ligaseCMN87_03410Not AvailableNegative751627 - 75303652265.1
transcriptional regulatorCMN87_03415Not AvailableNegative753123 - 75346112281.9
voc family virulence proteinCMN87_03420Not AvailablePositive753902 - 75432714878.6
bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimeraseCMN87_03425Not AvailablePositive754351 - 75590151523.8
Trna-leuNot AvailableNot AvailablePositive756053 - 756137Not Available
trigger factorCMN87_03435Not AvailablePositive756280 - 75762950632.7
atp-dependent clp endopeptidase, proteolytic subunit clppCMN87_03440Not AvailablePositive757911 - 75854923095.9

Displaying genes 921 – 930 of 4327 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.