Stappia sp.

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Stappia

Description

Stappia sp. is a Gram-negative bacterium characterized by its rod shape. This species possesses a single replicon, which is significant in understanding its genomic organization and replication processes. The accession number for Stappia sp. is PBLF00000000.1, which provides a reference for researchers seeking to access its genomic data for further study. The classification of Stappia sp. as Gram-negative indicates that it has a thin peptidoglycan layer surrounded by an outer membrane, which is a defining feature of this group. This structural characteristic can influence the bacterium's susceptibility to antibiotics and its interaction with the environment. The ecological role of Stappia sp. is not explicitly detailed in the provided traits; however, Gram-negative bacteria are often found in diverse habitats and can play critical roles in nutrient cycling and interactions within microbial communities. Their ability to adapt to various environments may contribute to their survival and ecological significance. In conclusion, the characteristics of Stappia sp., including its Gram-negative nature and rod shape, suggest that it may play an important role in its ecosystem, although further research would be necessary to elucidate its specific biological and ecological functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusStappia
SpeciesStappia sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Stappia sp. isolate SP245 MHASMcontig_2899486, whole genome

Gene Summary

Adenine Count

801528 bp

Thymine Count

822423 bp

Guanine Count

1579826 bp

Cytosine Count

1537462 bp

Genome Length

4741554 bp

Protein-coding Genes

4135 genes

Non-Coding Genes

192 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l3CMN87_14970Not AvailableNegative3235373 - 323608324984.3
30s ribosomal protein s10CMN87_14975Not AvailableNegative3236107 - 323641511569.2
elongation factor tuCMN87_14980Not AvailableNegative3236471 - 323764642722.2
peptidase m23CMN87_14985Not AvailablePositive3238338 - 324032072274.9
atp-dependent chaperone clpbCMN87_14990Not AvailableNegative3240419 - 324301994667.0
hypothetical proteinCMN87_14995Not AvailableNegative3243327 - 324409727781.7
protein-(glutamine-n5) methyltransferase, release factor-specificCMN87_15000Not AvailableNegative3244516 - 324538530946.9
peptide chain release factor 1CMN87_15005Not AvailableNegative3245394 - 324646739395.5
phosphoenolpyruvate--protein phosphotransferaseCMN87_15010Not AvailableNegative3246571 - 324883883056.4
aspartate kinaseCMN87_15015Not AvailableNegative3248932 - 325018244405.1

Displaying genes 3051 – 3060 of 4327 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.