Stappia sp.

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Stappia

Description

Stappia sp. is a Gram-negative bacterium characterized by its rod shape. This species possesses a single replicon, which is significant in understanding its genomic organization and replication processes. The accession number for Stappia sp. is PBLF00000000.1, which provides a reference for researchers seeking to access its genomic data for further study. The classification of Stappia sp. as Gram-negative indicates that it has a thin peptidoglycan layer surrounded by an outer membrane, which is a defining feature of this group. This structural characteristic can influence the bacterium's susceptibility to antibiotics and its interaction with the environment. The ecological role of Stappia sp. is not explicitly detailed in the provided traits; however, Gram-negative bacteria are often found in diverse habitats and can play critical roles in nutrient cycling and interactions within microbial communities. Their ability to adapt to various environments may contribute to their survival and ecological significance. In conclusion, the characteristics of Stappia sp., including its Gram-negative nature and rod shape, suggest that it may play an important role in its ecosystem, although further research would be necessary to elucidate its specific biological and ecological functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusStappia
SpeciesStappia sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Stappia sp. isolate SP245 MHASMcontig_2899486, whole genome

Gene Summary

Adenine Count

801528 bp

Thymine Count

822423 bp

Guanine Count

1579826 bp

Cytosine Count

1537462 bp

Genome Length

4741554 bp

Protein-coding Genes

4135 genes

Non-Coding Genes

192 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinyl-coa--3-ketoacid-coa transferaseCMN87_13790Not AvailableNegative3000887 - 300158224753.6
hypothetical proteinCMN87_13795Not AvailablePositive3001831 - 300366963001.9
putrescine abc transporter permease potiCMN87_13800Not AvailableNegative3003681 - 300450229979.3
putrescine/spermidine abc transporter permeaseCMN87_13805Not AvailableNegative3004526 - 300551836682.5
polyamine abc transporter atp-binding proteinCMN87_13810Not AvailableNegative3005552 - 300670043100.1
spermidine/putrescine abc transporter substrate-binding protein potfCMN87_13815Not AvailableNegative3006829 - 300792040321.8
glutamine synthetaseCMN87_13820Not AvailableNegative3008099 - 300949051135.9
gntr family transcriptional regulatorCMN87_13825Not AvailablePositive3009691 - 301035623645.5
glutamine synthetaseCMN87_13830Not AvailablePositive3010548 - 301187349651.6
aspartate aminotransferase family proteinCMN87_13835Not AvailablePositive3011972 - 301336950941.8

Displaying genes 2861 – 2870 of 4327 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.