Stappia sp.

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Stappia

Description

Stappia sp. is a Gram-negative bacterium characterized by its rod shape. This species possesses a single replicon, which is significant in understanding its genomic organization and replication processes. The accession number for Stappia sp. is PBLF00000000.1, which provides a reference for researchers seeking to access its genomic data for further study. The classification of Stappia sp. as Gram-negative indicates that it has a thin peptidoglycan layer surrounded by an outer membrane, which is a defining feature of this group. This structural characteristic can influence the bacterium's susceptibility to antibiotics and its interaction with the environment. The ecological role of Stappia sp. is not explicitly detailed in the provided traits; however, Gram-negative bacteria are often found in diverse habitats and can play critical roles in nutrient cycling and interactions within microbial communities. Their ability to adapt to various environments may contribute to their survival and ecological significance. In conclusion, the characteristics of Stappia sp., including its Gram-negative nature and rod shape, suggest that it may play an important role in its ecosystem, although further research would be necessary to elucidate its specific biological and ecological functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusStappia
SpeciesStappia sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Stappia sp. isolate SP245 MHASMcontig_2899486, whole genome

Gene Summary

Adenine Count

801528 bp

Thymine Count

822423 bp

Guanine Count

1579826 bp

Cytosine Count

1537462 bp

Genome Length

4741554 bp

Protein-coding Genes

4135 genes

Non-Coding Genes

192 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glyoxylate/hydroxypyruvate reductase aCMN87_13585Not AvailableNegative2960105 - 296104934195.7
dna recombination protein rmucCMN87_13590Not AvailableNegative2961130 - 296232043188.6
peptide deformylaseCMN87_13595Not AvailablePositive2962402 - 296292019503.6
methionyl-trna formyltransferaseCMN87_13600Not AvailablePositive2963068 - 296402433518.6
gnat family n-acetyltransferaseCMN87_13605Not AvailablePositive2964128 - 296465518062.7
trna pseudouridine(38-40) synthase truaCMN87_13610Not AvailablePositive2964687 - 296549929762.2
hypothetical proteinCMN87_13615Not AvailableNegative2965509 - 296634230131.4
amino acid abc transporter substrate-binding proteinCMN87_13620Not AvailablePositive2966864 - 296806340895.1
iron-responsive transcriptional regulatorCMN87_13625Not AvailableNegative2968207 - 296870418034.7
lysr family transcriptional regulatorCMN87_13630Not AvailableNegative2968768 - 296972134470.4

Displaying genes 2821 – 2830 of 4327 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.