Stappia sp.

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Stappia

Description

Stappia sp. is a Gram-negative bacterium characterized by its rod shape. This species possesses a single replicon, which is significant in understanding its genomic organization and replication processes. The accession number for Stappia sp. is PBLF00000000.1, which provides a reference for researchers seeking to access its genomic data for further study. The classification of Stappia sp. as Gram-negative indicates that it has a thin peptidoglycan layer surrounded by an outer membrane, which is a defining feature of this group. This structural characteristic can influence the bacterium's susceptibility to antibiotics and its interaction with the environment. The ecological role of Stappia sp. is not explicitly detailed in the provided traits; however, Gram-negative bacteria are often found in diverse habitats and can play critical roles in nutrient cycling and interactions within microbial communities. Their ability to adapt to various environments may contribute to their survival and ecological significance. In conclusion, the characteristics of Stappia sp., including its Gram-negative nature and rod shape, suggest that it may play an important role in its ecosystem, although further research would be necessary to elucidate its specific biological and ecological functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusStappia
SpeciesStappia sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Stappia sp. isolate SP245 MHASMcontig_2899486, whole genome

Gene Summary

Adenine Count

801528 bp

Thymine Count

822423 bp

Guanine Count

1579826 bp

Cytosine Count

1537462 bp

Genome Length

4741554 bp

Protein-coding Genes

4135 genes

Non-Coding Genes

192 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCMN87_00145Not AvailableNegative26453 - 2702220431.5
cold-shock proteinCMN87_00150Not AvailableNegative27034 - 2754318704.4
duf1223 domain-containing proteinCMN87_00155Not AvailableNegative27706 - 2842525923.1
dsbe family thiol:disulfide interchange proteinCMN87_00160Not AvailableNegative28569 - 2916521259.8
heme exporter protein ccmdCMN87_00165Not AvailableNegative29186 - 293867108.7
heme transporter hemcCMN87_00170Not AvailableNegative29383 - 3017128484.7
heme exporter protein ccmbCMN87_00175Not AvailableNegative30271 - 3096923565.9
heme abc exporter atp-binding protein ccmaCMN87_00180Not AvailableNegative30966 - 3158921575.1
aconitate hydratase acnaCMN87_00185Not AvailablePositive31973 - 3471799643.4
atp-dependent carboxylate-amine ligaseCMN87_00190Not AvailableNegative34844 - 3591737286.3

Displaying genes 271 – 280 of 4327 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.