Pelagibacteraceae bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Pelagibacterales

Family

Candidatus Pelagibacteraceae

Genus

Description

Pelagibacteraceae bacterium is characterized by having a single replicon, indicating a streamlined genomic architecture. This trait is significant as it suggests a potentially efficient replication mechanism, which is often associated with bacteria that inhabit nutrient-limited environments. The genome of this bacterium is cataloged under the accession number PBDW00000000.1, providing a reference for further genomic studies and comparisons within the Pelagibacteraceae family. Pelagibacteraceae is known to include some of the most abundant marine bacteria, playing a crucial role in oceanic carbon cycling and nutrient dynamics. Their presence in various aquatic ecosystems highlights their ecological importance, particularly in oligotrophic waters where resources are scarce. The single replicon feature may confer advantages in such environments, allowing for rapid adaptation and survival. In summary, the Pelagibacteraceae bacterium, with its single replicon and documented genomic information, exemplifies a group of microorganisms that are integral to marine ecological processes. Their efficient replication strategy and prevalence in nutrient-poor waters underscore their role in maintaining the balance of marine ecosystems and contributing to biogeochemical cycles.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Pelagibacteraceae bacterium isolate SP337

Gene Summary

Adenine Count

493659 bp

Thymine Count

496815 bp

Guanine Count

205813 bp

Cytosine Count

208384 bp

Genome Length

1404973 bp

Protein-coding Genes

1432 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCMI95_01455Not AvailableNegative271611 - 27269341444.7
dna topoisomerase (atp-hydrolyzing) subunit bCMI95_01460Not AvailableNegative272710 - 27520892955.0
hypothetical proteinCMI95_01465Not AvailableNegative275201 - 27633143088.3
dna polymerase iii subunit betaCMI95_01470Not AvailableNegative276346 - 27746141187.2
chromosomal replication initiator protein dnaaCMI95_01475Not AvailableNegative277513 - 27890453056.4
30s ribosomal protein s20CMI95_01480Not AvailableNegative279094 - 27935410065.6
dna-formamidopyrimidine glycosylaseCMI95_01485Not AvailableNegative279440 - 28027031785.2
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylaseCMI95_01490Not AvailablePositive280280 - 28101728169.1
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabcCMI95_01495Not AvailablePositive281005 - 28219544351.3
dutp diphosphataseCMI95_01500Not AvailablePositive282188 - 28264616560.6

Displaying genes 291 – 300 of 342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.