Pelagibacteraceae bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Pelagibacterales

Family

Candidatus Pelagibacteraceae

Genus

Description

Pelagibacteraceae bacterium is characterized by having a single replicon, indicating a streamlined genomic architecture. This trait is significant as it suggests a potentially efficient replication mechanism, which is often associated with bacteria that inhabit nutrient-limited environments. The genome of this bacterium is cataloged under the accession number PBDW00000000.1, providing a reference for further genomic studies and comparisons within the Pelagibacteraceae family. Pelagibacteraceae is known to include some of the most abundant marine bacteria, playing a crucial role in oceanic carbon cycling and nutrient dynamics. Their presence in various aquatic ecosystems highlights their ecological importance, particularly in oligotrophic waters where resources are scarce. The single replicon feature may confer advantages in such environments, allowing for rapid adaptation and survival. In summary, the Pelagibacteraceae bacterium, with its single replicon and documented genomic information, exemplifies a group of microorganisms that are integral to marine ecological processes. Their efficient replication strategy and prevalence in nutrient-poor waters underscore their role in maintaining the balance of marine ecosystems and contributing to biogeochemical cycles.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Pelagibacteraceae bacterium isolate SP337

Gene Summary

Adenine Count

493659 bp

Thymine Count

496815 bp

Guanine Count

205813 bp

Cytosine Count

208384 bp

Genome Length

1404973 bp

Protein-coding Genes

1432 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCMI95_00100Not AvailableNegative17090 - 1782728921.5
microcin abc transporter atp-binding proteinCMI95_00105Not AvailableNegative17880 - 1946959361.0
abc transporter permeaseCMI95_00110Not AvailableNegative19471 - 2049938754.6
microcin abc transporter permeaseCMI95_00115Not AvailableNegative20502 - 2160240720.2
hypothetical proteinCMI95_00120Not AvailableNegative21634 - 2346670145.6
histidinol phosphate phosphataseCMI95_00125Not AvailableNegative23543 - 2432529204.9
cytochrome c family proteinCMI95_00130Not AvailableNegative24341 - 2488920243.5
3-deoxy-manno-octulosonate cytidylyltransferaseCMI95_00135Not AvailablePositive24971 - 2570527429.3
prephenate dehydrataseCMI95_00140Not AvailablePositive25702 - 2654731028.0
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive26601 - 26695Not Available

Displaying genes 21 – 30 of 342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.