Pelagibacteraceae bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Pelagibacterales

Family

Candidatus Pelagibacteraceae

Genus

Description

Pelagibacteraceae bacterium is characterized by having a single replicon, indicating a streamlined genomic architecture. This trait is significant as it suggests a potentially efficient replication mechanism, which is often associated with bacteria that inhabit nutrient-limited environments. The genome of this bacterium is cataloged under the accession number PBDW00000000.1, providing a reference for further genomic studies and comparisons within the Pelagibacteraceae family. Pelagibacteraceae is known to include some of the most abundant marine bacteria, playing a crucial role in oceanic carbon cycling and nutrient dynamics. Their presence in various aquatic ecosystems highlights their ecological importance, particularly in oligotrophic waters where resources are scarce. The single replicon feature may confer advantages in such environments, allowing for rapid adaptation and survival. In summary, the Pelagibacteraceae bacterium, with its single replicon and documented genomic information, exemplifies a group of microorganisms that are integral to marine ecological processes. Their efficient replication strategy and prevalence in nutrient-poor waters underscore their role in maintaining the balance of marine ecosystems and contributing to biogeochemical cycles.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Pelagibacteraceae bacterium isolate SP337

Gene Summary

Adenine Count

493659 bp

Thymine Count

496815 bp

Guanine Count

205813 bp

Cytosine Count

208384 bp

Genome Length

1404973 bp

Protein-coding Genes

1432 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
integration host factor subunit betaCMI95_01355Not AvailablePositive250223 - 25051011024.4
orotidine-5'-phosphate decarboxylaseCMI95_01360Not AvailablePositive250523 - 25121526161.6
hypothetical proteinCMI95_01365Not AvailablePositive251196 - 25186725704.9
tryptophan synthase subunit betaCMI95_01370Not AvailablePositive251854 - 25307145182.2
tryptophan synthase subunit alphaCMI95_01375Not AvailablePositive253064 - 25385529450.4
acetyl-coa carboxylase carboxyl transferase subunit betaCMI95_01380Not AvailablePositive253852 - 25470331849.9
bifunctional folylpolyglutamate synthase/dihydrofolate synthaseCMI95_01385Not AvailablePositive254700 - 25598948515.2
thioredoxinCMI95_01390Not AvailableNegative255957 - 25628011923.4
hypothetical proteinCMI95_01395Not AvailableNegative256310 - 25701727181.0
hypothetical proteinCMI95_01400Not AvailableNegative257007 - 25799339562.9

Displaying genes 271 – 280 of 342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.