Pelagibacteraceae bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Pelagibacterales

Family

Candidatus Pelagibacteraceae

Genus

Description

Pelagibacteraceae bacterium is characterized by having a single replicon, indicating a streamlined genomic architecture. This trait is significant as it suggests a potentially efficient replication mechanism, which is often associated with bacteria that inhabit nutrient-limited environments. The genome of this bacterium is cataloged under the accession number PBDW00000000.1, providing a reference for further genomic studies and comparisons within the Pelagibacteraceae family. Pelagibacteraceae is known to include some of the most abundant marine bacteria, playing a crucial role in oceanic carbon cycling and nutrient dynamics. Their presence in various aquatic ecosystems highlights their ecological importance, particularly in oligotrophic waters where resources are scarce. The single replicon feature may confer advantages in such environments, allowing for rapid adaptation and survival. In summary, the Pelagibacteraceae bacterium, with its single replicon and documented genomic information, exemplifies a group of microorganisms that are integral to marine ecological processes. Their efficient replication strategy and prevalence in nutrient-poor waters underscore their role in maintaining the balance of marine ecosystems and contributing to biogeochemical cycles.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Pelagibacteraceae bacterium isolate SP337

Gene Summary

Adenine Count

493659 bp

Thymine Count

496815 bp

Guanine Count

205813 bp

Cytosine Count

208384 bp

Genome Length

1404973 bp

Protein-coding Genes

1432 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cystathionine beta-lyaseCMI95_00540Not AvailableNegative96866 - 9802043516.8
amino acid abc transporter substrate-binding proteinCMI95_00545Not AvailablePositive98068 - 9910238723.2
abc transporter atp-binding proteinCMI95_00550Not AvailablePositive99114 - 9985727787.0
ala-trna(pro) hydrolaseCMI95_00555Not AvailableNegative99854 - 10054326535.1
hypothetical proteinCMI95_00560Not AvailableNegative100553 - 10084311709.2
amino acid abc transporter substrate-binding proteinCMI95_00565Not AvailablePositive100993 - 10178228531.5
amidaseCMI95_00570Not AvailableNegative101783 - 10234021400.7
branched-chain amino acid abc transporter permeaseCMI95_00575Not AvailableNegative102344 - 10337537897.8
branched-chain amino acid abc transporter permeaseCMI95_00580Not AvailableNegative103375 - 10426532258.2
abc transporter atp-binding proteinCMI95_00585Not AvailableNegative104262 - 10497823482.7

Displaying genes 111 – 120 of 342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.