Ochrobactrum soli strain FI11154

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Brucellaceae

Genus

Ochrobactrum

Description

Ochrobactrum soli strain FI11154 is characterized by having a single replicon, indicating a streamlined genomic organization. This strain is cataloged under the accession number OOFM00000000.1, which provides a reference for its genetic material and facilitates further research and study within scientific databases. The genus Ochrobactrum is known for its environmental versatility, often found in diverse habitats such as soil, water, and plant-associated environments. This adaptability suggests that strain FI11154 may play a role in nutrient cycling or bioremediation processes in its native ecosystem. The presence of only one replicon in its genomic structure could contribute to its metabolic efficiency, allowing it to thrive in varying environmental conditions. The ecological significance of Ochrobactrum species, including strain FI11154, lies in their potential interactions with other microorganisms and their influence on soil health. Their ability to adapt and potentially degrade pollutants could make them important players in maintaining ecological balance, especially in contaminated environments. Understanding the characteristics and capabilities of such strains can enhance our knowledge of microbial ecology and inform strategies for environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyBrucellaceae
GenusOchrobactrum
SpeciesOchrobactrum soli
Strainstrain FI11154

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ochrobactrum soli strain FI11154 genome assembly, contig:

Gene Summary

Adenine Count

1180815 bp

Thymine Count

1175616 bp

Guanine Count

1555403 bp

Cytosine Count

1570469 bp

Genome Length

5482303 bp

Protein-coding Genes

5423 genes

Non-Coding Genes

205 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent dna ligase clustered with ku protein, ligdOHAE_4471Not AvailablePositive388772 - 39127092788.0
ku domain proteinOHAE_4472Not AvailableNegative391293 - 39209630301.5
hypothetical protein pa2244 (similar to dna topoisomerase ib, but possibly involved in glycosyl-transfer)OHAE_4473Not AvailablePositive392235 - 39326038204.7
lipoprotein blcOHAE_4474Not AvailablePositive393321 - 39386619833.8
nudix hydrolaseOHAE_4475Not AvailablePositive394331 - 39479217785.7
hypothetical proteinOHAE_4476Not AvailablePositive394869 - 3950366639.6
putative oxidoreductaseOHAE_4477Not AvailableNegative395196 - 39605630545.6
fog: chey-like receiverOHAE_4478Not AvailableNegative396160 - 39652813330.9
dna-directed rna polymerase specialized sigma subunit, sigma24-likeOHAE_4479Not AvailableNegative396662 - 39716218899.7
hypothetical proteinOHAE_4480Not AvailableNegative397548 - 3977035972.39

Displaying genes 641 – 650 of 5628 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.