Ochrobactrum soli strain FI11154

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Brucellaceae

Genus

Ochrobactrum

Description

Ochrobactrum soli strain FI11154 is characterized by having a single replicon, indicating a streamlined genomic organization. This strain is cataloged under the accession number OOFM00000000.1, which provides a reference for its genetic material and facilitates further research and study within scientific databases. The genus Ochrobactrum is known for its environmental versatility, often found in diverse habitats such as soil, water, and plant-associated environments. This adaptability suggests that strain FI11154 may play a role in nutrient cycling or bioremediation processes in its native ecosystem. The presence of only one replicon in its genomic structure could contribute to its metabolic efficiency, allowing it to thrive in varying environmental conditions. The ecological significance of Ochrobactrum species, including strain FI11154, lies in their potential interactions with other microorganisms and their influence on soil health. Their ability to adapt and potentially degrade pollutants could make them important players in maintaining ecological balance, especially in contaminated environments. Understanding the characteristics and capabilities of such strains can enhance our knowledge of microbial ecology and inform strategies for environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyBrucellaceae
GenusOchrobactrum
SpeciesOchrobactrum soli
Strainstrain FI11154

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ochrobactrum soli strain FI11154 genome assembly, contig:

Gene Summary

Adenine Count

1180815 bp

Thymine Count

1175616 bp

Guanine Count

1555403 bp

Cytosine Count

1570469 bp

Genome Length

5482303 bp

Protein-coding Genes

5423 genes

Non-Coding Genes

205 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoglycolate phosphataseOHAE_4243Not AvailablePositive170655 - 17131123993.5
phosphogluconate repressor hexr, rpir familyOHAE_4244Not AvailablePositive171385 - 17218529313.4
ribose 5-phosphate isomerase aOHAE_4245Not AvailablePositive172246 - 17295025649.0
hypothetical proteinOHAE_4246Not AvailableNegative172932 - 1731809140.84
abc transporter, periplasmic sugar-binding protein precursorOHAE_4247Not AvailablePositive173148 - 17423039821.3
d-xylose transport atp-binding protein xylgOHAE_4248Not AvailablePositive174315 - 17584154989.2
ribose abc transport system, permease protein rbsc (tc 3.a.1.2.1)OHAE_4249Not AvailablePositive175870 - 17686835059.4
d-lactate dehydrogenaseOHAE_4250Not AvailablePositive176904 - 17861063252.7
rna polymerase sigma-70 factor, ecf subfamilyOHAE_4251Not AvailableNegative178922 - 17955722673.1
rna polymerase sigma-70 factor, ecf subfamilyOHAE_4252Not AvailableNegative179547 - 18005618909.7

Displaying genes 411 – 420 of 5628 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.