Hoeflea halophila strain KCTC 23107

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Parahoeflea

Description

Hoeflea halophila strain KCTC 23107 is characterized as a rod-shaped bacterium. It possesses a single replicon, which indicates a streamlined genetic organization conducive to its adaptability in various environments. The strain is cataloged under the accession number OCPC00000000.1. The rod shape of Hoeflea halophila may play a significant role in its ecological interactions, particularly in saline environments where it is commonly found. This morphology can facilitate motility and nutrient uptake, allowing the bacterium to thrive in conditions where other forms may struggle. As a member of the microbial community in such habitats, Hoeflea halophila can contribute to biogeochemical cycles, possibly aiding in the degradation of organic materials or the cycling of nutrients. The presence of a single replicon suggests a simplicity that may enhance its survival strategies in fluctuating saline conditions. This feature could be advantageous in quickly adapting to changes in environmental stressors, such as salinity and temperature variations. Overall, the traits of Hoeflea halophila strain KCTC 23107 highlight its potential ecological significance in saline ecosystems, emphasizing its role in microbial diversity and function in such habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusParahoeflea
SpeciesParahoeflea halophila
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hoeflea halophila strain KCTC 23107 genome assembly, contig:

Gene Summary

Adenine Count

823545 bp

Thymine Count

809031 bp

Guanine Count

1247271 bp

Cytosine Count

1312756 bp

Genome Length

4192799 bp

Protein-coding Genes

3862 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseSAMN05877838_1845Not AvailablePositive1917765 - 191862230568.4
dephospho-coa kinaseSAMN05877838_1846Not AvailablePositive1918619 - 191921821605.1
dna polymerase-3 subunit epsilonSAMN05877838_1847Not AvailablePositive1919219 - 191992325779.6
protein translocase subunit secbSAMN05877838_1848Not AvailableNegative1920115 - 192063018576.2
upf0716 protein fxsaSAMN05877838_1849Not AvailableNegative1920710 - 192124619207.6
predicted lipid-binding transport protein (tim44 family)SAMN05877838_1850Not AvailablePositive1921379 - 192208626009.7
membrane-bound lytic murein transglycosylase aSAMN05877838_1851Not AvailablePositive1922086 - 192321040586.9
dna-nicking smr family endonucleaseSAMN05877838_1852Not AvailablePositive1923200 - 192375120326.7
transcriptional regulatorSAMN05877838_1853Not AvailablePositive1923748 - 192416115015.8
uncharacterized protein duf1402SAMN05877838_1854Not AvailableNegative1924210 - 192521437135.9

Displaying genes 1831 – 1840 of 3938 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.