Alysiella filiformis DSM 16848

microaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Alysiella

Description

Alysiella filiformis DSM 16848 is a microaerophilic bacterium, meaning it thrives in environments with reduced oxygen levels. This characteristic suggests that the organism is adapted to specific ecological niches where oxygen concentration is lower than that of the atmosphere, which may influence its habitat and ecological interactions. The strain has a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation to its environment. The accessions for this organism include OCNF00000000.1, which can be referenced for genomic and taxonomic information. Understanding the oxygen requirement and genetic structure of Alysiella filiformis can provide insights into its ecological roles and potential applications. For instance, its microaerophilic nature may allow it to participate in biogeochemical cycles in anaerobic or low-oxygen environments, contributing to processes such as organic matter decomposition or nutrient cycling. This underscores the importance of studying microaerophilic organisms like Alysiella filiformis in understanding microbial ecology and their roles in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusAlysiella
SpeciesAlysiella filiformis
StrainDSM 16848

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alysiella filiformis DSM 16848 genome assembly, contig:

Gene Summary

Adenine Count

636630 bp

Thymine Count

633633 bp

Guanine Count

550185 bp

Cytosine Count

558307 bp

Genome Length

2385602 bp

Protein-coding Genes

2280 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diaminopimelate epimeraseSAMN02746062_00517Not AvailableNegative518961 - 51980930828.9
23s rrna pseudouridine2604 synthaseSAMN02746062_00518Not AvailablePositive519906 - 52064927769.8
inner membrane proteinSAMN02746062_00519Not AvailableNegative521056 - 52165823154.1
two-component system, ompr family, catabolic regulation response regulator crebSAMN02746062_00520Not AvailablePositive521877 - 52255725672.2
two-component system, ompr family, sensor histidine kinase crecSAMN02746062_00521Not AvailablePositive522551 - 52350735972.4
xaa-his dipeptidase . metallo peptidase. merops family m20cSAMN02746062_00522Not AvailableNegative523519 - 52495251692.8
glutaminyl-trna synthetaseSAMN02746062_00523Not AvailablePositive525078 - 52676064665.3
hypothetical proteinSAMN02746062_00524Not AvailableNegative527097 - 52737510779.3
putative holin-x, holin superfamily iiiSAMN02746062_00525Not AvailableNegative527362 - 52776915105.0
membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, elab/yqjd/duf883 familySAMN02746062_00526Not AvailableNegative527861 - 52817212003.4

Displaying genes 551 – 560 of 2351 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.