Alysiella filiformis DSM 16848

microaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Alysiella

Description

Alysiella filiformis DSM 16848 is a microaerophilic bacterium, meaning it thrives in environments with reduced oxygen levels. This characteristic suggests that the organism is adapted to specific ecological niches where oxygen concentration is lower than that of the atmosphere, which may influence its habitat and ecological interactions. The strain has a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation to its environment. The accessions for this organism include OCNF00000000.1, which can be referenced for genomic and taxonomic information. Understanding the oxygen requirement and genetic structure of Alysiella filiformis can provide insights into its ecological roles and potential applications. For instance, its microaerophilic nature may allow it to participate in biogeochemical cycles in anaerobic or low-oxygen environments, contributing to processes such as organic matter decomposition or nutrient cycling. This underscores the importance of studying microaerophilic organisms like Alysiella filiformis in understanding microbial ecology and their roles in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusAlysiella
SpeciesAlysiella filiformis
StrainDSM 16848

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alysiella filiformis DSM 16848 genome assembly, contig:

Gene Summary

Adenine Count

636630 bp

Thymine Count

633633 bp

Guanine Count

550185 bp

Cytosine Count

558307 bp

Genome Length

2385602 bp

Protein-coding Genes

2280 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase)SAMN02746062_00337Not AvailablePositive338128 - 33866719585.8
lipopolysaccharide export system protein lptcSAMN02746062_00338Not AvailablePositive338664 - 33924221633.5
lipopolysaccharide export system protein lptaSAMN02746062_00339Not AvailablePositive339220 - 33974718550.3
lipopolysaccharide export system atp-binding proteinSAMN02746062_00340Not AvailablePositive339765 - 34049327075.0
rna polymerase, sigma 54 subunit, rpon/siglSAMN02746062_00341Not AvailablePositive340742 - 34210051373.7
putative sigma-54 modulation proteinSAMN02746062_00342Not AvailablePositive342261 - 34254810751.0
biotin-[acetyl-coa-carboxylase] ligase / type 3 pantothenate kinaseSAMN02746062_00343Not AvailablePositive342657 - 34441464400.0
hypothetical proteinSAMN02746062_00344Not AvailablePositive344419 - 34501220870.2
glutamate-5-semialdehyde dehydrogenaseSAMN02746062_00345Not AvailableNegative345077 - 34633645925.2
methyl-galactoside transport system substrate-binding proteinSAMN02746062_00346Not AvailablePositive346581 - 34763038221.7

Displaying genes 371 – 380 of 2351 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.