Alysiella filiformis DSM 16848

microaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Alysiella

Description

Alysiella filiformis DSM 16848 is a microaerophilic bacterium, meaning it thrives in environments with reduced oxygen levels. This characteristic suggests that the organism is adapted to specific ecological niches where oxygen concentration is lower than that of the atmosphere, which may influence its habitat and ecological interactions. The strain has a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation to its environment. The accessions for this organism include OCNF00000000.1, which can be referenced for genomic and taxonomic information. Understanding the oxygen requirement and genetic structure of Alysiella filiformis can provide insights into its ecological roles and potential applications. For instance, its microaerophilic nature may allow it to participate in biogeochemical cycles in anaerobic or low-oxygen environments, contributing to processes such as organic matter decomposition or nutrient cycling. This underscores the importance of studying microaerophilic organisms like Alysiella filiformis in understanding microbial ecology and their roles in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusAlysiella
SpeciesAlysiella filiformis
StrainDSM 16848

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alysiella filiformis DSM 16848 genome assembly, contig:

Gene Summary

Adenine Count

636630 bp

Thymine Count

633633 bp

Guanine Count

550185 bp

Cytosine Count

558307 bp

Genome Length

2385602 bp

Protein-coding Genes

2280 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
muramoyltetrapeptide carboxypeptidaseSAMN02746062_00327Not AvailableNegative323772 - 32497443253.8
diadenosine tetraphosphate (ap4a) hydrolaseSAMN02746062_00328Not AvailableNegative324987 - 32539415789.0
mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance proteinSAMN02746062_00329Not AvailablePositive325612 - 32682344169.2
outer membrane protein ompaSAMN02746062_00330Not AvailablePositive326959 - 32760922319.6
solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5SAMN02746062_00331Not AvailablePositive327780 - 32918650458.3
glutamate dehydrogenase (nadp+)SAMN02746062_00332Not AvailableNegative329780 - 33111748266.9
phosphoenolpyruvate carboxylase, type 1SAMN02746062_00333Not AvailableNegative331528 - 334227100578.0
udp-n-acetylglucosamine-n- acetylmuramylpentapeptide n-acetylglucosamine transferaseSAMN02746062_00334Not AvailableNegative334448 - 33551837687.2
cell division protein ftswSAMN02746062_00335Not AvailableNegative335515 - 33680748021.7
arabinose-5-phosphate isomeraseSAMN02746062_00336Not AvailablePositive336965 - 33793334221.9

Displaying genes 361 – 370 of 2351 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.