Nitrosomonas ureae strain Nm42

Gram-negativeNAaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Nitrosomonadales

Family

Nitrosomonadaceae

Genus

Nitrosomonas

Description

Nitrosomonas ureae strain Nm42 is a Gram-negative, aerobic bacterium primarily found in freshwater environments, specifically within the freshwater area of the River Schelde Estuary, as well as in marine settings and Mediterranean soils. This strain is characterized by its mesophilic temperature range, which facilitates its growth in moderate temperature conditions. One notable feature of Nitrosomonas ureae Nm42 is its possession of flagella, which likely aids in its motility within aquatic environments. The organism has a single replicon and is cataloged under the accession number OCMU00000000.1, providing a reference point for further studies. The presence of Nitrosomonas ureae in diverse aquatic habitats highlights its ecological role in nitrogen cycling, particularly in the conversion of ammonia to nitrite. This process is essential for maintaining nutrient balance in freshwater and marine ecosystems. The strain’s adaptability to various environments, including freshwater and marine ecosystems, suggests that it plays a significant role in biogeochemical cycles, contributing to nitrogen availability in these habitats. Furthermore, its presence in Mediterranean soils indicates its potential impact on terrestrial ecosystems as well. Understanding the distribution and functional capabilities of Nitrosomonas ureae Nm42 can enhance our knowledge of microbial contributions to nutrient cycling in both aquatic and terrestrial environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNitrosomonadales
FamilyNitrosomonadaceae
GenusNitrosomonas
SpeciesNitrosomonas ureae
Strainstrain Nm42

Profile

Physiology
Gram staining propertiesNegative
ShapeNA
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangemesophilic
HabitatFresh water; freshwater area of the River Schelde Estuary; Marine; Mediterranean soils
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nitrosomonas ureae strain Nm42 genome assembly, contig:

Gene Summary

Adenine Count

1048742 bp

Thymine Count

1032980 bp

Guanine Count

810234 bp

Cytosine Count

854857 bp

Genome Length

3746813 bp

Protein-coding Genes

3314 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crispr-associated protein, csy4 familySAMN06297164_2702Not AvailablePositive2744228 - 274487224327.2
abc-type uncharacterized transport system, permease componentSAMN06297164_2703Not AvailableNegative2745640 - 274647931423.6
signal recognition particle subunit ffh/srp54 (srp54)SAMN06297164_2704Not AvailablePositive2746616 - 274796548940.3
integrase core domain-containing proteinSAMN06297164_2706Not AvailablePositive2748876 - 27490617378.74
deoxyuridine 5'-triphosphate nucleotidohydrolaseSAMN06297164_2707Not AvailableNegative2749246 - 274969816241.7
phosphopantothenate-cysteine ligase /phosphopantothenoylcysteine decarboxylaseSAMN06297164_2708Not AvailableNegative2749682 - 275090843737.6
dna replication and repair protein radcSAMN06297164_2709Not AvailablePositive2751108 - 275178224601.8
lsu ribosomal protein l28pSAMN06297164_2710Not AvailablePositive2751840 - 27520768986.0
lsu ribosomal protein l33pSAMN06297164_2711Not AvailablePositive2752116 - 27522716087.55
stearoyl-coa desaturase (delta-9 desaturase)SAMN06297164_2712Not AvailableNegative2752322 - 275351245658.2

Displaying genes 2531 – 2540 of 3413 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.