Nitrosomonas ureae strain Nm42

Gram-negativeNAaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Nitrosomonadales

Family

Nitrosomonadaceae

Genus

Nitrosomonas

Description

Nitrosomonas ureae strain Nm42 is a Gram-negative, aerobic bacterium primarily found in freshwater environments, specifically within the freshwater area of the River Schelde Estuary, as well as in marine settings and Mediterranean soils. This strain is characterized by its mesophilic temperature range, which facilitates its growth in moderate temperature conditions. One notable feature of Nitrosomonas ureae Nm42 is its possession of flagella, which likely aids in its motility within aquatic environments. The organism has a single replicon and is cataloged under the accession number OCMU00000000.1, providing a reference point for further studies. The presence of Nitrosomonas ureae in diverse aquatic habitats highlights its ecological role in nitrogen cycling, particularly in the conversion of ammonia to nitrite. This process is essential for maintaining nutrient balance in freshwater and marine ecosystems. The strain’s adaptability to various environments, including freshwater and marine ecosystems, suggests that it plays a significant role in biogeochemical cycles, contributing to nitrogen availability in these habitats. Furthermore, its presence in Mediterranean soils indicates its potential impact on terrestrial ecosystems as well. Understanding the distribution and functional capabilities of Nitrosomonas ureae Nm42 can enhance our knowledge of microbial contributions to nutrient cycling in both aquatic and terrestrial environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNitrosomonadales
FamilyNitrosomonadaceae
GenusNitrosomonas
SpeciesNitrosomonas ureae
Strainstrain Nm42

Profile

Physiology
Gram staining propertiesNegative
ShapeNA
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangemesophilic
HabitatFresh water; freshwater area of the River Schelde Estuary; Marine; Mediterranean soils
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nitrosomonas ureae strain Nm42 genome assembly, contig:

Gene Summary

Adenine Count

1048742 bp

Thymine Count

1032980 bp

Guanine Count

810234 bp

Cytosine Count

854857 bp

Genome Length

3746813 bp

Protein-coding Genes

3314 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine palmitoyltransferaseSAMN06297164_1344Not AvailableNegative1346623 - 134780142292.9
acyl carrier proteinSAMN06297164_1345Not AvailableNegative1347801 - 13480589549.55
nucleoside-diphosphate-sugar epimeraseSAMN06297164_1346Not AvailableNegative1348088 - 134900234705.3
fatty-acyl-coa synthaseSAMN06297164_1347Not AvailableNegative1349008 - 135083767417.0
ceramidaseSAMN06297164_1348Not AvailableNegative1351342 - 135212129600.7
dna replication and repair protein radaSAMN06297164_1349Not AvailableNegative1352176 - 135352848729.6
dtdp-4-dehydrorhamnose 3,5-epimeraseSAMN06297164_1350Not AvailableNegative1353577 - 135412220416.2
glucose-1-phosphate thymidylyltransferaseSAMN06297164_1351Not AvailableNegative1354139 - 135507134686.6
atp-binding cassette, subfamily b, msbaSAMN06297164_1352Not AvailablePositive1355222 - 135693464775.2
ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epscSAMN06297164_1353Not AvailableNegative1356963 - 135885270000.0

Displaying genes 1311 – 1320 of 3413 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.