Nitrosomonas ureae strain Nm42

Gram-negativeNAaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Nitrosomonadales

Family

Nitrosomonadaceae

Genus

Nitrosomonas

Description

Nitrosomonas ureae strain Nm42 is a Gram-negative, aerobic bacterium primarily found in freshwater environments, specifically within the freshwater area of the River Schelde Estuary, as well as in marine settings and Mediterranean soils. This strain is characterized by its mesophilic temperature range, which facilitates its growth in moderate temperature conditions. One notable feature of Nitrosomonas ureae Nm42 is its possession of flagella, which likely aids in its motility within aquatic environments. The organism has a single replicon and is cataloged under the accession number OCMU00000000.1, providing a reference point for further studies. The presence of Nitrosomonas ureae in diverse aquatic habitats highlights its ecological role in nitrogen cycling, particularly in the conversion of ammonia to nitrite. This process is essential for maintaining nutrient balance in freshwater and marine ecosystems. The strain’s adaptability to various environments, including freshwater and marine ecosystems, suggests that it plays a significant role in biogeochemical cycles, contributing to nitrogen availability in these habitats. Furthermore, its presence in Mediterranean soils indicates its potential impact on terrestrial ecosystems as well. Understanding the distribution and functional capabilities of Nitrosomonas ureae Nm42 can enhance our knowledge of microbial contributions to nutrient cycling in both aquatic and terrestrial environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNitrosomonadales
FamilyNitrosomonadaceae
GenusNitrosomonas
SpeciesNitrosomonas ureae
Strainstrain Nm42

Profile

Physiology
Gram staining propertiesNegative
ShapeNA
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangemesophilic
HabitatFresh water; freshwater area of the River Schelde Estuary; Marine; Mediterranean soils
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nitrosomonas ureae strain Nm42 genome assembly, contig:

Gene Summary

Adenine Count

1048742 bp

Thymine Count

1032980 bp

Guanine Count

810234 bp

Cytosine Count

854857 bp

Genome Length

3746813 bp

Protein-coding Genes

3314 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN06297164_1265Not AvailablePositive1262095 - 126237310388.4
chemosensory pili system protein chpa (sensor histidine kinase/response regulator)SAMN06297164_1266Not AvailableNegative1262624 - 1267162169089.0
twitching motility protein piljSAMN06297164_1267Not AvailableNegative1267203 - 126937779304.3
l-threonine ammonia-lyaseSAMN06297164_1268Not AvailableNegative1269608 - 127111955857.6
eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant)SAMN06297164_1269Not AvailableNegative1271297 - 127236139383.9
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN06297164_1270Not AvailableNegative1272437 - 127418265240.4
fecr family proteinSAMN06297164_1271Not AvailableNegative1274179 - 127584361484.5
l,d-transpeptidase catalytic domainSAMN06297164_1272Not AvailableNegative1275902 - 127638117858.8
pp_01175SAMN06297164_1273Not AvailableNegative1276371 - 1276856Not Available
[lsu ribosomal protein l3p]-glutamine n5-methyltransferaseSAMN06297164_1274Not AvailablePositive1276997 - 127789333390.6

Displaying genes 1241 – 1250 of 3413 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.