Pseudomonas sp. LAIL14HWK12:I3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. LAIL14HWK12:I3 is characterized by a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environmental conditions. The accession number for this strain is OCMM00000000.1, which serves as a unique identifier for its genomic data in biological databases. Pseudomonas species are known for their metabolic versatility, which allows them to thrive in diverse habitats, from soil to water. This adaptability is often linked to their ability to degrade a wide range of organic compounds, making them significant in bioremediation efforts. The presence of a single replicon in Pseudomonas sp. LAIL14HWK12:I3 may suggest a focused evolutionary path that enhances its survival and functional capabilities in specific ecological niches. Overall, the traits of Pseudomonas sp. LAIL14HWK12:I3 underline its potential role in ecological interactions, particularly in nutrient cycling and the degradation of pollutants. Such characteristics could be valuable in environmental microbiology and biotechnology applications, where harnessing the metabolic capabilities of microorganisms like Pseudomonas is essential for sustainable practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. LAIL14HWK12:I3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. LAIL14HWK12:I3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. LAIL14HWK12:I3 genome assembly, contig:

Gene Summary

Adenine Count

1077997 bp

Thymine Count

1070290 bp

Guanine Count

1750608 bp

Cytosine Count

1765982 bp

Genome Length

5666577 bp

Protein-coding Genes

5119 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator, arac familySAMN05660198_02897Not AvailablePositive3122841 - 312377035842.2
lysr family transcriptional regulator, pca operon transcriptional activatorSAMN05660198_02898Not AvailablePositive3123780 - 312471233913.4
hypothetical proteinSAMN05660198_02899Not AvailableNegative3124720 - 312602146919.3
fkbp-type peptidyl-prolyl cis-trans isomerase fklbSAMN05660198_02900Not AvailablePositive3126347 - 312712327172.4
uncharacterized membrane protein ykva, duf1232 familySAMN05660198_02901Not AvailablePositive3127412 - 312785216545.3
predicted transcriptional regulator with c-terminal cbs domainsSAMN05660198_02902Not AvailablePositive3127964 - 312829611631.8
hypothetical proteinSAMN05660198_02903Not AvailablePositive3128293 - 312866113842.6
eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant)SAMN05660198_02904Not AvailableNegative3128681 - 312960734348.7
c-terminal processing peptidase-1. serine peptidase. merops family s41aSAMN05660198_02905Not AvailableNegative3129726 - 313177176485.0
putative nad(p)h quinone oxidoreductase, pig3 familySAMN05660198_02906Not AvailablePositive3131947 - 313290933943.0

Displaying genes 2891 – 2900 of 5201 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.