Thalassospira xiamenensis strain USBA 78

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Thalassospiraceae

Genus

Thalassospira

Description

Thalassospira xiamenensis strain USBA 78 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in various environments. The genomic data for this strain is accessible under the accession number OBMM00000000.1. The classification of Thalassospira xiamenensis within the Thalassospira genus suggests a potential ecological role in marine environments, as members of this genus are often associated with oceanic habitats. The Gram-negative nature of this strain implies the presence of an outer membrane, which may provide advantages in resisting environmental stresses, such as antimicrobial agents or varying osmotic conditions found in marine ecosystems. In summary, the unique traits of Thalassospira xiamenensis strain USBA 78, including its Gram-negative status, rod shape, and single replicon, contribute to our understanding of its ecological potential. Its adaptation mechanisms may play a significant role in the dynamics of marine microbial communities, where such bacteria can influence nutrient cycling and interact with other microorganisms in their habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyThalassospiraceae
GenusThalassospira
SpeciesThalassospira xiamenensis
Strainstrain USBA 78

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thalassospira xiamenensis strain USBA 78 genome assembly, contig:

Gene Summary

Adenine Count

1263362 bp

Thymine Count

1205147 bp

Guanine Count

1404841 bp

Cytosine Count

1526714 bp

Genome Length

5400534 bp

Protein-coding Genes

5078 genes

Non-Coding Genes

113 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamate 5-kinaseSAMN05428964_103182Not AvailableNegative3009015 - 301013039457.7
gtp-binding proteinSAMN05428964_103183Not AvailableNegative3010127 - 301116438080.3
lsu ribosomal protein l27pSAMN05428964_103184Not AvailableNegative3011344 - 30116049030.82
lsu ribosomal protein l21pSAMN05428964_103185Not AvailableNegative3011635 - 301194611301.9
Trna-serNot AvailableNot AvailablePositive3012239 - 3012328Not Available
hypothetical proteinSAMN05428964_103187Not AvailablePositive3012784 - 301430456954.4
iron (metal) dependent repressor, dtxr familySAMN05428964_103188Not AvailableNegative3014363 - 301479416285.3
manganese/zinc/iron transport system substrate-binding proteinSAMN05428964_103189Not AvailablePositive3014937 - 301591135227.1
manganese/zinc/iron transport system atp- binding proteinSAMN05428964_103190Not AvailablePositive3015935 - 301673528919.8
manganese/zinc/iron transport system permease proteinSAMN05428964_103191Not AvailablePositive3016775 - 301799543013.5

Displaying genes 2901 – 2910 of 5191 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.