Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodospirillales
Family
Thalassospiraceae
Genus
Thalassospira
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodospirillales |
| Family | Thalassospiraceae |
| Genus | Thalassospira |
| Species | Thalassospira xiamenensis |
| Strain | strain USBA 78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1263362 bp
Thymine Count
1205147 bp
Guanine Count
1404841 bp
Cytosine Count
1526714 bp
Genome Length
5400534 bp
Protein-coding Genes
5078 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05428964_10168 | Not Available | Negative | 68032 - 69066 | 37322.8 |
| transcriptional regulator, lysr family | SAMN05428964_10169 | Not Available | Negative | 69301 - 70242 | 34235.5 |
| 3-oxoadipate enol-lactonase | SAMN05428964_10170 | Not Available | Positive | 70373 - 71173 | 28908.1 |
| 4-carboxymuconolactone decarboxylase | SAMN05428964_10171 | Not Available | Positive | 71166 - 71558 | 14368.0 |
| protocatechuate 3,4-dioxygenase, beta subunit | SAMN05428964_10172 | Not Available | Positive | 71564 - 72265 | 25887.7 |
| protocatechuate 3,4-dioxygenase, alpha subunit | SAMN05428964_10173 | Not Available | Positive | 72269 - 72856 | 21217.7 |
| glutaconate coa-transferase subunit a | SAMN05428964_10174 | Not Available | Positive | 72988 - 73842 | 30945.1 |
| glutaconate coa-transferase subunit b | SAMN05428964_10175 | Not Available | Positive | 73857 - 74630 | 27594.9 |
| 3-oxoadipyl-coa thiolase | SAMN05428964_10176 | Not Available | Positive | 74642 - 75847 | 41666.0 |
| 3-carboxy-cis,cis-muconate cycloisomerase | SAMN05428964_10177 | Not Available | Positive | 75987 - 77327 | 47433.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
