Thalassospira xiamenensis strain USBA 78

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Thalassospiraceae

Genus

Thalassospira

Description

Thalassospira xiamenensis strain USBA 78 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in various environments. The genomic data for this strain is accessible under the accession number OBMM00000000.1. The classification of Thalassospira xiamenensis within the Thalassospira genus suggests a potential ecological role in marine environments, as members of this genus are often associated with oceanic habitats. The Gram-negative nature of this strain implies the presence of an outer membrane, which may provide advantages in resisting environmental stresses, such as antimicrobial agents or varying osmotic conditions found in marine ecosystems. In summary, the unique traits of Thalassospira xiamenensis strain USBA 78, including its Gram-negative status, rod shape, and single replicon, contribute to our understanding of its ecological potential. Its adaptation mechanisms may play a significant role in the dynamics of marine microbial communities, where such bacteria can influence nutrient cycling and interact with other microorganisms in their habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyThalassospiraceae
GenusThalassospira
SpeciesThalassospira xiamenensis
Strainstrain USBA 78

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thalassospira xiamenensis strain USBA 78 genome assembly, contig:

Gene Summary

Adenine Count

1263362 bp

Thymine Count

1205147 bp

Guanine Count

1404841 bp

Cytosine Count

1526714 bp

Genome Length

5400534 bp

Protein-coding Genes

5078 genes

Non-Coding Genes

113 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap-type c4-dicarboxylate transport system, substrate-binding proteinSAMN05428964_10168Not AvailableNegative68032 - 6906637322.8
transcriptional regulator, lysr familySAMN05428964_10169Not AvailableNegative69301 - 7024234235.5
3-oxoadipate enol-lactonaseSAMN05428964_10170Not AvailablePositive70373 - 7117328908.1
4-carboxymuconolactone decarboxylaseSAMN05428964_10171Not AvailablePositive71166 - 7155814368.0
protocatechuate 3,4-dioxygenase, beta subunitSAMN05428964_10172Not AvailablePositive71564 - 7226525887.7
protocatechuate 3,4-dioxygenase, alpha subunitSAMN05428964_10173Not AvailablePositive72269 - 7285621217.7
glutaconate coa-transferase subunit aSAMN05428964_10174Not AvailablePositive72988 - 7384230945.1
glutaconate coa-transferase subunit bSAMN05428964_10175Not AvailablePositive73857 - 7463027594.9
3-oxoadipyl-coa thiolaseSAMN05428964_10176Not AvailablePositive74642 - 7584741666.0
3-carboxy-cis,cis-muconate cycloisomeraseSAMN05428964_10177Not AvailablePositive75987 - 7732747433.9

Displaying genes 91 – 100 of 5191 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.