Hydrogenobacter hydrogenophilus strain DSM 2913

Gram-negativerod

Kingdom

Pseudomonadati

Phylum

Aquificota

Class

Aquificia

Order

Aquificales

Family

Aquificaceae

Genus

Hydrogenobacter

Description

Hydrogenobacter hydrogenophilus strain DSM 2913 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitate motility. This strain has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The accession number associated with this strain is OBEN00000000.1, which can be used for further genomic and taxonomic reference. As a member of the genus Hydrogenobacter, this organism is likely to be involved in unique metabolic processes, particularly those related to hydrogen oxidation. The presence of flagella suggests that H. hydrogenophilus may actively navigate toward optimal environmental conditions, which is crucial for its survival and functionality in habitats where hydrogen is available as an energy source. From an ecological perspective, the role of Hydrogenobacter hydrogenophilus could be significant in biogeochemical cycles, particularly in environments where hydrogen is produced, such as geothermal springs or anaerobic sediments. Understanding its characteristics can provide insights into its ecological functions, such as its potential in bioremediation processes or its contributions to microbial communities in extreme environments.

Taxonomy

KingdomPseudomonadati
PhylumAquificota
ClassAquificia
OrderAquificales
FamilyAquificaceae
GenusHydrogenobacter
SpeciesHydrogenobacter hydrogenophilus
Strainstrain DSM 2913

Profile

Physiology
Gram staining propertiesNegative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Hydrogenobacter hydrogenophilus strain DSM 2913
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenobacter hydrogenophilus strain DSM 2913 genome assembly,

Gene Summary

Adenine Count

463734 bp

Thymine Count

473027 bp

Guanine Count

330731 bp

Cytosine Count

333997 bp

Genome Length

1601489 bp

Protein-coding Genes

1693 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane protein, cobalt-zinc-cadmium efflux systemSAMN06265353_0941Not AvailablePositive867915 - 86912346689.4
membrane fusion protein, cobalt-zinc-cadmium efflux systemSAMN06265353_0942Not AvailablePositive869113 - 87013838186.8
cobalt-zinc-cadmium resistance protein czcaSAMN06265353_0943Not AvailablePositive870135 - 873164111892.0
hypothetical proteinSAMN06265353_0944Not AvailablePositive873148 - 8733789034.02
integrase/recombinase xerdSAMN06265353_0945Not AvailablePositive873419 - 87428533866.5
trna (guanine37-n1)-methyltransferaseSAMN06265353_0946Not AvailablePositive874282 - 87502528407.8
sulfide dehydrogenase (flavoprotein) subunit sudbSAMN06265353_0947Not AvailableNegative875015 - 87573727085.8
membrane-bound lytic murein transglycosylase dSAMN06265353_0948Not AvailablePositive876610 - 87742530906.5
two-component system, ntrc family, response regulatorSAMN06265353_0949Not AvailablePositive877448 - 87879151224.3
hypothetical proteinSAMN06265353_0950Not AvailableNegative878808 - 8790328408.3

Displaying genes 931 – 940 of 1739 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.