Hydrogenobacter hydrogenophilus strain DSM 2913

Gram-negativerod

Kingdom

Pseudomonadati

Phylum

Aquificota

Class

Aquificia

Order

Aquificales

Family

Aquificaceae

Genus

Hydrogenobacter

Description

Hydrogenobacter hydrogenophilus strain DSM 2913 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitate motility. This strain has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The accession number associated with this strain is OBEN00000000.1, which can be used for further genomic and taxonomic reference. As a member of the genus Hydrogenobacter, this organism is likely to be involved in unique metabolic processes, particularly those related to hydrogen oxidation. The presence of flagella suggests that H. hydrogenophilus may actively navigate toward optimal environmental conditions, which is crucial for its survival and functionality in habitats where hydrogen is available as an energy source. From an ecological perspective, the role of Hydrogenobacter hydrogenophilus could be significant in biogeochemical cycles, particularly in environments where hydrogen is produced, such as geothermal springs or anaerobic sediments. Understanding its characteristics can provide insights into its ecological functions, such as its potential in bioremediation processes or its contributions to microbial communities in extreme environments.

Taxonomy

KingdomPseudomonadati
PhylumAquificota
ClassAquificia
OrderAquificales
FamilyAquificaceae
GenusHydrogenobacter
SpeciesHydrogenobacter hydrogenophilus
Strainstrain DSM 2913

Profile

Physiology
Gram staining propertiesNegative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Hydrogenobacter hydrogenophilus strain DSM 2913
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenobacter hydrogenophilus strain DSM 2913 genome assembly,

Gene Summary

Adenine Count

463734 bp

Thymine Count

473027 bp

Guanine Count

330731 bp

Cytosine Count

333997 bp

Genome Length

1601489 bp

Protein-coding Genes

1693 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosylaminoimidazole-succinocarboxamide synthaseSAMN06265353_0730Not AvailableNegative660623 - 66132427027.1
long-chain fatty acid transport proteinSAMN06265353_0731Not AvailableNegative661365 - 66261245125.4
6-carboxyhexanoate-coa ligaseSAMN06265353_0732Not AvailableNegative662705 - 66343928094.3
udp-n-acetylglucosamine-n- acetylmuramylpentapeptide n-acetylglucosamine transferaseSAMN06265353_0733Not AvailableNegative663432 - 66449339728.5
glutamyl-trna synthetase/nondiscriminating glutamyl-trna synthetaseSAMN06265353_0734Not AvailableNegative664490 - 66592055536.9
trna nucleotidyltransferase (cca-adding enzyme)SAMN06265353_0735Not AvailableNegative665910 - 66836092945.4
dna polymerase-3 subunit betaSAMN06265353_0736Not AvailablePositive668376 - 66946140056.8
glycine dehydrogenase (decarboxylating) beta subunitSAMN06265353_0737Not AvailableNegative669448 - 67089354045.2
Trna-hisNot AvailableNot AvailablePositive670911 - 670986Not Available
dna-binding protein hu-betaSAMN06265353_0739Not AvailableNegative671057 - 6713299467.83

Displaying genes 721 – 730 of 1739 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.