Hydrogenobacter hydrogenophilus strain DSM 2913

Gram-negativerod

Kingdom

Pseudomonadati

Phylum

Aquificota

Class

Aquificia

Order

Aquificales

Family

Aquificaceae

Genus

Hydrogenobacter

Description

Hydrogenobacter hydrogenophilus strain DSM 2913 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitate motility. This strain has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The accession number associated with this strain is OBEN00000000.1, which can be used for further genomic and taxonomic reference. As a member of the genus Hydrogenobacter, this organism is likely to be involved in unique metabolic processes, particularly those related to hydrogen oxidation. The presence of flagella suggests that H. hydrogenophilus may actively navigate toward optimal environmental conditions, which is crucial for its survival and functionality in habitats where hydrogen is available as an energy source. From an ecological perspective, the role of Hydrogenobacter hydrogenophilus could be significant in biogeochemical cycles, particularly in environments where hydrogen is produced, such as geothermal springs or anaerobic sediments. Understanding its characteristics can provide insights into its ecological functions, such as its potential in bioremediation processes or its contributions to microbial communities in extreme environments.

Taxonomy

KingdomPseudomonadati
PhylumAquificota
ClassAquificia
OrderAquificales
FamilyAquificaceae
GenusHydrogenobacter
SpeciesHydrogenobacter hydrogenophilus
Strainstrain DSM 2913

Profile

Physiology
Gram staining propertiesNegative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Hydrogenobacter hydrogenophilus strain DSM 2913
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenobacter hydrogenophilus strain DSM 2913 genome assembly,

Gene Summary

Adenine Count

463734 bp

Thymine Count

473027 bp

Guanine Count

330731 bp

Cytosine Count

333997 bp

Genome Length

1601489 bp

Protein-coding Genes

1693 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyltransferase involved in cell wall bisynthesisSAMN06265353_0275Not AvailableNegative250392 - 25145340525.4
acireductone synthaseSAMN06265353_0276Not AvailableNegative251461 - 25213525934.0
acireductone dioxygenase apoproteinSAMN06265353_0277Not AvailableNegative252120 - 25267121345.3
trigger factorSAMN06265353_0278Not AvailablePositive252726 - 25401549931.7
atp-dependent clp protease, protease subunitSAMN06265353_0279Not AvailablePositive253999 - 25459822280.3
atp-dependent clp protease atp-binding subunit clpxSAMN06265353_0280Not AvailablePositive254623 - 25586146161.2
periplasmic chaperone for outer membrane proteins skpSAMN06265353_0281Not AvailablePositive255882 - 25636718421.3
udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferaseSAMN06265353_0282Not AvailablePositive256364 - 25737136336.9
hypothetical proteinSAMN06265353_0283Not AvailableNegative257353 - 25785917500.6
peptidase family m23SAMN06265353_0284Not AvailablePositive257962 - 25857622460.2

Displaying genes 271 – 280 of 1739 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.