Hydrogenobacter hydrogenophilus strain DSM 2913

Gram-negativerod

Kingdom

Pseudomonadati

Phylum

Aquificota

Class

Aquificia

Order

Aquificales

Family

Aquificaceae

Genus

Hydrogenobacter

Description

Hydrogenobacter hydrogenophilus strain DSM 2913 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitate motility. This strain has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The accession number associated with this strain is OBEN00000000.1, which can be used for further genomic and taxonomic reference. As a member of the genus Hydrogenobacter, this organism is likely to be involved in unique metabolic processes, particularly those related to hydrogen oxidation. The presence of flagella suggests that H. hydrogenophilus may actively navigate toward optimal environmental conditions, which is crucial for its survival and functionality in habitats where hydrogen is available as an energy source. From an ecological perspective, the role of Hydrogenobacter hydrogenophilus could be significant in biogeochemical cycles, particularly in environments where hydrogen is produced, such as geothermal springs or anaerobic sediments. Understanding its characteristics can provide insights into its ecological functions, such as its potential in bioremediation processes or its contributions to microbial communities in extreme environments.

Taxonomy

KingdomPseudomonadati
PhylumAquificota
ClassAquificia
OrderAquificales
FamilyAquificaceae
GenusHydrogenobacter
SpeciesHydrogenobacter hydrogenophilus
Strainstrain DSM 2913

Profile

Physiology
Gram staining propertiesNegative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Hydrogenobacter hydrogenophilus strain DSM 2913
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenobacter hydrogenophilus strain DSM 2913 genome assembly,

Gene Summary

Adenine Count

463734 bp

Thymine Count

473027 bp

Guanine Count

330731 bp

Cytosine Count

333997 bp

Genome Length

1601489 bp

Protein-coding Genes

1693 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN06265353_1367Not AvailablePositive1256941 - 125764526958.6
modular fes cluster scaffolding protein nifuSAMN06265353_1368Not AvailablePositive1257721 - 125818217010.2
trna u34 2-thiouridine synthase mnma/trmu, contains the pp-loop atpase domainSAMN06265353_1369Not AvailablePositive1258179 - 125921939276.1
tusa-related sulfurtransferaseSAMN06265353_1370Not AvailablePositive1259216 - 12594679295.22
protein of unknown functionSAMN06265353_1371Not AvailablePositive1259464 - 12597069707.8
fe-s cluster biogenesis protein nfua, 4fe-4s-binding domainSAMN06265353_1372Not AvailablePositive1259703 - 12599549427.49
shikimate dehydrogenaseSAMN06265353_1373Not AvailablePositive1259951 - 126075129872.1
n-acetylglutamate kinaseSAMN06265353_1374Not AvailableNegative1260748 - 126164732900.2
adp-l-glycero-d-manno-heptose 6-epimeraseSAMN06265353_1375Not AvailableNegative1261638 - 126256435446.6
valyl-trna synthetaseSAMN06265353_1376Not AvailableNegative1262561 - 1265590117863.0

Displaying genes 1351 – 1360 of 1739 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.