Pseudomonas sp. LAMO17WK12:I5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. LAMO17WK12:I5 is characterized by having a single replicon, indicating a streamlined genetic organization that may enhance its adaptability and survival in various environments. The strain is cataloged under the accession number OBDS00000000.1, serving as a reference for researchers studying its genomic features and potential applications. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches, including soil, water, and plant environments. This strain may exhibit similar traits, allowing it to interact with different microorganisms and contribute to biogeochemical cycles. The single replicon trait suggests a simplified genomic architecture compared to other bacteria that may possess multiple replicons. This can influence the efficiency of genetic regulation and replication processes, potentially leading to faster growth rates or responses to environmental stresses. Understanding the genomic structure of Pseudomonas sp. LAMO17WK12:I5 could provide insights into its ecological roles, such as biodegradation or bioremediation capabilities. In summary, Pseudomonas sp. LAMO17WK12:I5, with its single replicon and documented accession, stands as a potentially significant organism within microbial ecosystems. Its genetic simplicity may confer advantages in adaptability, positioning it as a candidate for further studies in microbial ecology and applied microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. LAMO17WK12:I5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. LAMO17WK12:I5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. LAMO17WK12:I5 genome assembly, contig:

Gene Summary

Adenine Count

1206615 bp

Thymine Count

1213622 bp

Guanine Count

1850280 bp

Cytosine Count

1830099 bp

Genome Length

6103916 bp

Protein-coding Genes

5315 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05660455_04672Not AvailableNegative5112600 - 511297113540.4
type i secretion c-terminal target domain (vc_a0849 subclass)SAMN05660455_04674Not AvailableNegative5113779 - 5122385289191.0
outer membrane protein, adhesin transport systemSAMN05660455_04675Not AvailablePositive5122917 - 512427550292.8
atp-binding cassette, subfamily c, lapbSAMN05660455_04676Not AvailablePositive5124433 - 512659578225.9
membrane fusion protein, adhesin transport systemSAMN05660455_04677Not AvailablePositive5126791 - 512815249746.6
dtw domain-containing protein yfipSAMN05660455_04678Not AvailableNegative5128297 - 512889321841.7
transcriptional regulator, lysr familySAMN05660455_04679Not AvailableNegative5128899 - 512979233263.2
agmatinaseSAMN05660455_04680Not AvailablePositive5130132 - 513108234132.1
ketosteroid isomerase homologSAMN05660455_04681Not AvailablePositive5131093 - 513151515748.2
purine-cytosine permeaseSAMN05660455_04682Not AvailablePositive5131572 - 513307453316.5

Displaying genes 4671 – 4680 of 5490 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.