Pseudomonas sp. LAMO17WK12:I5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. LAMO17WK12:I5 is characterized by having a single replicon, indicating a streamlined genetic organization that may enhance its adaptability and survival in various environments. The strain is cataloged under the accession number OBDS00000000.1, serving as a reference for researchers studying its genomic features and potential applications. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches, including soil, water, and plant environments. This strain may exhibit similar traits, allowing it to interact with different microorganisms and contribute to biogeochemical cycles. The single replicon trait suggests a simplified genomic architecture compared to other bacteria that may possess multiple replicons. This can influence the efficiency of genetic regulation and replication processes, potentially leading to faster growth rates or responses to environmental stresses. Understanding the genomic structure of Pseudomonas sp. LAMO17WK12:I5 could provide insights into its ecological roles, such as biodegradation or bioremediation capabilities. In summary, Pseudomonas sp. LAMO17WK12:I5, with its single replicon and documented accession, stands as a potentially significant organism within microbial ecosystems. Its genetic simplicity may confer advantages in adaptability, positioning it as a candidate for further studies in microbial ecology and applied microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. LAMO17WK12:I5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. LAMO17WK12:I5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. LAMO17WK12:I5 genome assembly, contig:

Gene Summary

Adenine Count

1206615 bp

Thymine Count

1213622 bp

Guanine Count

1850280 bp

Cytosine Count

1830099 bp

Genome Length

6103916 bp

Protein-coding Genes

5315 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenaseSAMN05660455_03987Not AvailableNegative4369863 - 437018011395.5
iron complex transport system substrate-binding proteinSAMN05660455_03988Not AvailablePositive4370343 - 437121530342.8
iron complex transport system permease proteinSAMN05660455_03989Not AvailablePositive4371212 - 437224935614.0
iron complex transport system atp-binding proteinSAMN05660455_03990Not AvailablePositive4372249 - 437301627540.5
uncharacterized iron-regulated proteinSAMN05660455_03991Not AvailablePositive4373037 - 437388831105.6
cyclic nucleotide-binding domain-containing proteinSAMN05660455_03993Not AvailableNegative4374115 - 437491529640.5
transcriptional regulator of competence genes, tfox/sxy familySAMN05660455_03994Not AvailableNegative4374932 - 437520410146.1
uncharacterized low-complexity proteinsSAMN05660455_03995Not AvailableNegative4375485 - 437582912784.1
hypothetical proteinSAMN05660455_03996Not AvailableNegative4375921 - 437747757465.6
penicillin-binding protein 1bSAMN05660455_03997Not AvailablePositive4377594 - 437991885286.4

Displaying genes 4001 – 4010 of 5490 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.