Pseudomonas sp. LAMO17WK12:I5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. LAMO17WK12:I5 is characterized by having a single replicon, indicating a streamlined genetic organization that may enhance its adaptability and survival in various environments. The strain is cataloged under the accession number OBDS00000000.1, serving as a reference for researchers studying its genomic features and potential applications. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches, including soil, water, and plant environments. This strain may exhibit similar traits, allowing it to interact with different microorganisms and contribute to biogeochemical cycles. The single replicon trait suggests a simplified genomic architecture compared to other bacteria that may possess multiple replicons. This can influence the efficiency of genetic regulation and replication processes, potentially leading to faster growth rates or responses to environmental stresses. Understanding the genomic structure of Pseudomonas sp. LAMO17WK12:I5 could provide insights into its ecological roles, such as biodegradation or bioremediation capabilities. In summary, Pseudomonas sp. LAMO17WK12:I5, with its single replicon and documented accession, stands as a potentially significant organism within microbial ecosystems. Its genetic simplicity may confer advantages in adaptability, positioning it as a candidate for further studies in microbial ecology and applied microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. LAMO17WK12:I5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. LAMO17WK12:I5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. LAMO17WK12:I5 genome assembly, contig:

Gene Summary

Adenine Count

1206615 bp

Thymine Count

1213622 bp

Guanine Count

1850280 bp

Cytosine Count

1830099 bp

Genome Length

6103916 bp

Protein-coding Genes

5315 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05660455_03508Not AvailableNegative3881261 - 388179119739.6
membrane dipeptidaseSAMN05660455_03509Not AvailableNegative3882005 - 388298235920.9
uncharacterized conserved protein yect, duf1311 familySAMN05660455_03510Not AvailablePositive3883217 - 388361814621.0
mrna-degrading endonuclease rele, toxin component of the relbe toxin-antitoxin systemSAMN05660455_03511Not AvailablePositive3883831 - 38840859821.98
predicted dna-binding proteinsSAMN05660455_03512Not AvailablePositive3884069 - 388439211904.3
protein of unknown functionSAMN05660455_03513Not AvailablePositive3884421 - 388483714914.0
transcriptional regulator, arac family with amidase-like domainSAMN05660455_03514Not AvailableNegative3884977 - 388592135414.7
glycine betaine/proline transport system substrate-binding proteinSAMN05660455_03515Not AvailablePositive3886113 - 388705734286.3
uncharacterized conserved protein, duf849 familySAMN05660455_03516Not AvailablePositive3887175 - 388806231481.2
carnitine 3-dehydrogenaseSAMN05660455_03517Not AvailablePositive3888220 - 388918534742.5

Displaying genes 3531 – 3540 of 5490 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.