Pseudomonas sp. LAMO17WK12:I5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. LAMO17WK12:I5 is characterized by having a single replicon, indicating a streamlined genetic organization that may enhance its adaptability and survival in various environments. The strain is cataloged under the accession number OBDS00000000.1, serving as a reference for researchers studying its genomic features and potential applications. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches, including soil, water, and plant environments. This strain may exhibit similar traits, allowing it to interact with different microorganisms and contribute to biogeochemical cycles. The single replicon trait suggests a simplified genomic architecture compared to other bacteria that may possess multiple replicons. This can influence the efficiency of genetic regulation and replication processes, potentially leading to faster growth rates or responses to environmental stresses. Understanding the genomic structure of Pseudomonas sp. LAMO17WK12:I5 could provide insights into its ecological roles, such as biodegradation or bioremediation capabilities. In summary, Pseudomonas sp. LAMO17WK12:I5, with its single replicon and documented accession, stands as a potentially significant organism within microbial ecosystems. Its genetic simplicity may confer advantages in adaptability, positioning it as a candidate for further studies in microbial ecology and applied microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. LAMO17WK12:I5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. LAMO17WK12:I5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. LAMO17WK12:I5 genome assembly, contig:

Gene Summary

Adenine Count

1206615 bp

Thymine Count

1213622 bp

Guanine Count

1850280 bp

Cytosine Count

1830099 bp

Genome Length

6103916 bp

Protein-coding Genes

5315 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-demethylubiquinone-9 3-methyltransferaseSAMN05660455_03214Not AvailablePositive3560453 - 356115126059.5
phosphoglycolate phosphataseSAMN05660455_03215Not AvailablePositive3561156 - 356182724563.7
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN05660455_03216Not AvailablePositive3561995 - 356273526357.5
diguanylate cyclase (ggdef) domain-containing proteinSAMN05660455_03217Not AvailablePositive3563098 - 356402434253.1
pyrroloquinoline quinone (pqq) biosynthesis protein cSAMN05660455_03218Not AvailableNegative3564163 - 356495730468.4
diguanylate cyclase/phosphodiesterase with pas/pac sensor(s)SAMN05660455_03219Not AvailableNegative3565004 - 356746390981.9
the burps668_1122 family of deaminasesSAMN05660455_03220Not AvailablePositive3567638 - 3572254170738.0
atp-binding cassette, subfamily cSAMN05660455_03221Not AvailableNegative3572255 - 357407266336.3
putative protein-disulfide isomeraseSAMN05660455_03222Not AvailableNegative3574065 - 357470022876.3
upf0176 proteinSAMN05660455_03223Not AvailableNegative3574703 - 357564435506.1

Displaying genes 3241 – 3250 of 5490 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.