Pseudomonas sp. LAMO17WK12:I5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. LAMO17WK12:I5 is characterized by having a single replicon, indicating a streamlined genetic organization that may enhance its adaptability and survival in various environments. The strain is cataloged under the accession number OBDS00000000.1, serving as a reference for researchers studying its genomic features and potential applications. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches, including soil, water, and plant environments. This strain may exhibit similar traits, allowing it to interact with different microorganisms and contribute to biogeochemical cycles. The single replicon trait suggests a simplified genomic architecture compared to other bacteria that may possess multiple replicons. This can influence the efficiency of genetic regulation and replication processes, potentially leading to faster growth rates or responses to environmental stresses. Understanding the genomic structure of Pseudomonas sp. LAMO17WK12:I5 could provide insights into its ecological roles, such as biodegradation or bioremediation capabilities. In summary, Pseudomonas sp. LAMO17WK12:I5, with its single replicon and documented accession, stands as a potentially significant organism within microbial ecosystems. Its genetic simplicity may confer advantages in adaptability, positioning it as a candidate for further studies in microbial ecology and applied microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. LAMO17WK12:I5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. LAMO17WK12:I5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. LAMO17WK12:I5 genome assembly, contig:

Gene Summary

Adenine Count

1206615 bp

Thymine Count

1213622 bp

Guanine Count

1850280 bp

Cytosine Count

1830099 bp

Genome Length

6103916 bp

Protein-coding Genes

5315 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative spermidine/putrescine transport system substrate-binding proteinSAMN05660455_01972Not AvailableNegative2117644 - 211866936927.8
3,4-dihydroxy-2-butanone 4-phosphate synthase /gtp cyclohydrolase iiSAMN05660455_01973Not AvailableNegative2118992 - 212010140267.3
uncharacterized conserved protein, duf1330 familySAMN05660455_01974Not AvailablePositive2120171 - 212046711058.9
adp-ribose pyrophosphatase yjhb, nudix familySAMN05660455_01975Not AvailableNegative2120591 - 212115421181.4
transcriptional regulator, gntr familySAMN05660455_01976Not AvailableNegative2121156 - 212190827840.7
4-carboxymuconolactone decarboxylaseSAMN05660455_01977Not AvailableNegative2121967 - 212235614607.5
nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) familySAMN05660455_01978Not AvailableNegative2122403 - 212288817277.9
aldehyde dehydrogenase (acceptor)SAMN05660455_01979Not AvailableNegative2122901 - 212438253008.2
3-oxoadipate enol-lactonaseSAMN05660455_01980Not AvailableNegative2124379 - 212521229824.7
amino acid synthesisSAMN05660455_01981Not AvailableNegative2125244 - 212583421454.0

Displaying genes 2031 – 2040 of 5490 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.