Pseudomonas sp. LAMO17WK12:I5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. LAMO17WK12:I5 is characterized by having a single replicon, indicating a streamlined genetic organization that may enhance its adaptability and survival in various environments. The strain is cataloged under the accession number OBDS00000000.1, serving as a reference for researchers studying its genomic features and potential applications. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches, including soil, water, and plant environments. This strain may exhibit similar traits, allowing it to interact with different microorganisms and contribute to biogeochemical cycles. The single replicon trait suggests a simplified genomic architecture compared to other bacteria that may possess multiple replicons. This can influence the efficiency of genetic regulation and replication processes, potentially leading to faster growth rates or responses to environmental stresses. Understanding the genomic structure of Pseudomonas sp. LAMO17WK12:I5 could provide insights into its ecological roles, such as biodegradation or bioremediation capabilities. In summary, Pseudomonas sp. LAMO17WK12:I5, with its single replicon and documented accession, stands as a potentially significant organism within microbial ecosystems. Its genetic simplicity may confer advantages in adaptability, positioning it as a candidate for further studies in microbial ecology and applied microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. LAMO17WK12:I5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. LAMO17WK12:I5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. LAMO17WK12:I5 genome assembly, contig:

Gene Summary

Adenine Count

1206615 bp

Thymine Count

1213622 bp

Guanine Count

1850280 bp

Cytosine Count

1830099 bp

Genome Length

6103916 bp

Protein-coding Genes

5315 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome bd-i ubiquinol oxidase subunit 1 apoproteinSAMN05660455_01415Not AvailablePositive1496841 - 149824451713.8
cytochrome bd-i ubiquinol oxidase subunit 2 apoproteinSAMN05660455_01416Not AvailablePositive1498248 - 149926437287.8
protein of unknown functionSAMN05660455_01417Not AvailablePositive1499251 - 14994065784.27
rep element-mobilizing transposase raytSAMN05660455_01418Not AvailablePositive1500032 - 150049017543.1
hypothetical proteinSAMN05660455_01419Not AvailablePositive1500469 - 150127527785.8
uncharacterized conserved protein ykwd, contains cap (csp/antigen 5/pr1) domainSAMN05660455_01420Not AvailableNegative1501245 - 150209630116.5
cell wall hydrolaseSAMN05660455_01421Not AvailablePositive1502296 - 150291622356.5
transcriptional regulator, lysr familySAMN05660455_01422Not AvailableNegative1502913 - 150380032471.4
predicted arabinose efflux permease, mfs familySAMN05660455_01423Not AvailablePositive1503904 - 150529247069.0
l,d-transpeptidase catalytic domainSAMN05660455_01424Not AvailableNegative1505240 - 150595326233.4

Displaying genes 1481 – 1490 of 5490 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.