Geodermatophilus sabuli strain DSM 46844

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus sabuli strain DSM 46844 is a cocci-shaped bacterium that belongs to the genus Geodermatophilus. This strain is notable for possessing flagella, which are typically associated with motility in bacteria. G. sabuli has a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability in various environments. The strain is cataloged under the accession number OBDO00000000.1, which provides a reference for its genomic data. The presence of flagella suggests that G. sabuli has the capability for movement, which can be advantageous in its natural habitats, potentially allowing it to navigate through soil or other substrates. In terms of its ecological role, Geodermatophilus species are often found in terrestrial environments, particularly in arid or semi-arid regions, and are known to contribute to the degradation of organic matter. Given its characteristics, G. sabuli may play a significant role in soil health by participating in nutrient cycling and the breakdown of complex organic compounds. Overall, the traits of Geodermatophilus sabuli strain DSM 46844 highlight its potential importance in microbial ecology, particularly in ecosystems where soil microbial communities are crucial for maintaining environmental balance and supporting plant life.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus sabuli
Strainstrain DSM 46844

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus sabuli strain DSM 46844 genome assembly, contig:

Gene Summary

Adenine Count

717873 bp

Thymine Count

719543 bp

Guanine Count

2040587 bp

Cytosine Count

2040831 bp

Genome Length

5519188 bp

Protein-coding Genes

5211 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pas domain-containing proteinSAMN06893097_11533Not AvailablePositive5251412 - 525298355399.8
two component transcriptional regulator, luxr familySAMN06893097_11534Not AvailablePositive5252980 - 525365723443.3
4-hydroxy-4-methyl-2-oxoglutarate aldolaseSAMN06893097_11535Not AvailablePositive5253967 - 525466824409.3
vanillate o-demethylase monooxygenase subunitSAMN06893097_11536Not AvailablePositive5254706 - 525580640298.8
pimeloyl-acp methyl ester carboxylesteraseSAMN06893097_11537Not AvailablePositive5255803 - 525650725804.8
muconolactone d-isomeraseSAMN06893097_11538Not AvailablePositive5256546 - 525682110428.6
hypothetical proteinSAMN06893097_11539Not AvailablePositive5256821 - 52570157425.51
protocatechuate 4,5-dioxygenase alpha subunitSAMN06893097_11540Not AvailablePositive5257005 - 525737013712.4
protocatechuate 4,5-dioxygenase beta subunitSAMN06893097_11541Not AvailablePositive5257363 - 525822031051.8
cysteine dioxygenase type iSAMN06893097_11542Not AvailableNegative5258353 - 525888918892.4

Displaying genes 5001 – 5010 of 5264 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.