Geodermatophilus sabuli strain DSM 46844

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus sabuli strain DSM 46844 is a cocci-shaped bacterium that belongs to the genus Geodermatophilus. This strain is notable for possessing flagella, which are typically associated with motility in bacteria. G. sabuli has a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability in various environments. The strain is cataloged under the accession number OBDO00000000.1, which provides a reference for its genomic data. The presence of flagella suggests that G. sabuli has the capability for movement, which can be advantageous in its natural habitats, potentially allowing it to navigate through soil or other substrates. In terms of its ecological role, Geodermatophilus species are often found in terrestrial environments, particularly in arid or semi-arid regions, and are known to contribute to the degradation of organic matter. Given its characteristics, G. sabuli may play a significant role in soil health by participating in nutrient cycling and the breakdown of complex organic compounds. Overall, the traits of Geodermatophilus sabuli strain DSM 46844 highlight its potential importance in microbial ecology, particularly in ecosystems where soil microbial communities are crucial for maintaining environmental balance and supporting plant life.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus sabuli
Strainstrain DSM 46844

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus sabuli strain DSM 46844 genome assembly, contig:

Gene Summary

Adenine Count

717873 bp

Thymine Count

719543 bp

Guanine Count

2040587 bp

Cytosine Count

2040831 bp

Genome Length

5519188 bp

Protein-coding Genes

5211 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized membrane protein ydjx, tvp38/tmem64 family, snare-associated domainSAMN06893097_11430Not AvailableNegative5149483 - 515004618989.7
ribonuclease jSAMN06893097_11431Not AvailableNegative5150054 - 515173960665.3
phosphinothricin acetyltransferaseSAMN06893097_11432Not AvailablePositive5151932 - 515246819278.7
acyl-coa dehydrogenaseSAMN06893097_11433Not AvailablePositive5152575 - 515372641247.5
methylmalonyl-coa mutaseSAMN06893097_11434Not AvailablePositive5153815 - 5157069117994.0
hypothetical proteinSAMN06893097_11435Not AvailablePositive5157103 - 515786726979.1
acyl dehydrataseSAMN06893097_11436Not AvailableNegative5157870 - 515833116760.0
alpha-methylacyl-coa racemaseSAMN06893097_11437Not AvailablePositive5158397 - 515956040298.3
short chain enoyl-coa hydrataseSAMN06893097_11438Not AvailablePositive5159609 - 516037326167.4
predicted arabinose efflux permease, mfs familySAMN06893097_11439Not AvailablePositive5160486 - 516177844455.4

Displaying genes 4911 – 4920 of 5264 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.