Geodermatophilus sabuli strain DSM 46844

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus sabuli strain DSM 46844 is a cocci-shaped bacterium that belongs to the genus Geodermatophilus. This strain is notable for possessing flagella, which are typically associated with motility in bacteria. G. sabuli has a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability in various environments. The strain is cataloged under the accession number OBDO00000000.1, which provides a reference for its genomic data. The presence of flagella suggests that G. sabuli has the capability for movement, which can be advantageous in its natural habitats, potentially allowing it to navigate through soil or other substrates. In terms of its ecological role, Geodermatophilus species are often found in terrestrial environments, particularly in arid or semi-arid regions, and are known to contribute to the degradation of organic matter. Given its characteristics, G. sabuli may play a significant role in soil health by participating in nutrient cycling and the breakdown of complex organic compounds. Overall, the traits of Geodermatophilus sabuli strain DSM 46844 highlight its potential importance in microbial ecology, particularly in ecosystems where soil microbial communities are crucial for maintaining environmental balance and supporting plant life.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus sabuli
Strainstrain DSM 46844

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus sabuli strain DSM 46844 genome assembly, contig:

Gene Summary

Adenine Count

717873 bp

Thymine Count

719543 bp

Guanine Count

2040587 bp

Cytosine Count

2040831 bp

Genome Length

5519188 bp

Protein-coding Genes

5211 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein of unknown functionSAMN06893097_110178Not AvailableNegative4417460 - 441833829887.1
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylaseSAMN06893097_110179Not AvailableNegative4418367 - 441978550055.3
pimeloyl-acp methyl ester carboxylesteraseSAMN06893097_110180Not AvailablePositive4419843 - 442067929850.9
dna helicase-2 / atp-dependent dna helicase pcraSAMN06893097_110181Not AvailableNegative4420782 - 4424081116891.0
superfamily i dna or rna helicaseSAMN06893097_110182Not AvailableNegative4424155 - 4427322111903.0
alkylated dna nucleotide flippase atl1, participates in nucleotide excision repair, ada-like dna-binding domainSAMN06893097_110183Not AvailableNegative4427394 - 442772311168.4
hypothetical proteinSAMN06893097_110184Not AvailableNegative4427726 - 442875134105.9
tigr03086 family proteinSAMN06893097_110185Not AvailableNegative4428834 - 442945722032.8
adenylyltransferase and sulfurtransferaseSAMN06893097_110186Not AvailableNegative4429548 - 443070841764.3
protein of unknown functionSAMN06893097_110187Not AvailableNegative4430823 - 443181834158.9

Displaying genes 4231 – 4240 of 5264 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.