Geodermatophilus sabuli strain DSM 46844

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus sabuli strain DSM 46844 is a cocci-shaped bacterium that belongs to the genus Geodermatophilus. This strain is notable for possessing flagella, which are typically associated with motility in bacteria. G. sabuli has a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability in various environments. The strain is cataloged under the accession number OBDO00000000.1, which provides a reference for its genomic data. The presence of flagella suggests that G. sabuli has the capability for movement, which can be advantageous in its natural habitats, potentially allowing it to navigate through soil or other substrates. In terms of its ecological role, Geodermatophilus species are often found in terrestrial environments, particularly in arid or semi-arid regions, and are known to contribute to the degradation of organic matter. Given its characteristics, G. sabuli may play a significant role in soil health by participating in nutrient cycling and the breakdown of complex organic compounds. Overall, the traits of Geodermatophilus sabuli strain DSM 46844 highlight its potential importance in microbial ecology, particularly in ecosystems where soil microbial communities are crucial for maintaining environmental balance and supporting plant life.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus sabuli
Strainstrain DSM 46844

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus sabuli strain DSM 46844 genome assembly, contig:

Gene Summary

Adenine Count

717873 bp

Thymine Count

719543 bp

Guanine Count

2040587 bp

Cytosine Count

2040831 bp

Genome Length

5519188 bp

Protein-coding Genes

5211 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN06893097_10524Not AvailablePositive2619348 - 262005822882.2
dna-binding transcriptional regulator, marr familySAMN06893097_10525Not AvailablePositive2620084 - 262058717724.3
haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)eSAMN06893097_10526Not AvailablePositive2620717 - 262221653124.7
adp-heptose:lps heptosyltransferaseSAMN06893097_10527Not AvailablePositive2622291 - 262331334554.4
glycosyl transferases group 1SAMN06893097_10528Not AvailablePositive2623310 - 262430236246.2
glycosyltransferase involved in cell wall bisynthesisSAMN06893097_10529Not AvailablePositive2624361 - 262558743282.7
d-sedoheptulose 7-phosphate isomeraseSAMN06893097_10530Not AvailablePositive2625584 - 262625222864.1
rfae bifunctional protein, domain i/rfae bifunctional protein, domain iiSAMN06893097_10531Not AvailablePositive2626249 - 262764046339.4
adp-heptose:lps heptosyltransferaseSAMN06893097_10532Not AvailablePositive2627694 - 262863832339.9
von willebrand factor type a domain-containing proteinSAMN06893097_10533Not AvailableNegative2628660 - 263030955571.5

Displaying genes 2511 – 2520 of 5264 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.