Geodermatophilus sabuli strain DSM 46844

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus sabuli strain DSM 46844 is a cocci-shaped bacterium that belongs to the genus Geodermatophilus. This strain is notable for possessing flagella, which are typically associated with motility in bacteria. G. sabuli has a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability in various environments. The strain is cataloged under the accession number OBDO00000000.1, which provides a reference for its genomic data. The presence of flagella suggests that G. sabuli has the capability for movement, which can be advantageous in its natural habitats, potentially allowing it to navigate through soil or other substrates. In terms of its ecological role, Geodermatophilus species are often found in terrestrial environments, particularly in arid or semi-arid regions, and are known to contribute to the degradation of organic matter. Given its characteristics, G. sabuli may play a significant role in soil health by participating in nutrient cycling and the breakdown of complex organic compounds. Overall, the traits of Geodermatophilus sabuli strain DSM 46844 highlight its potential importance in microbial ecology, particularly in ecosystems where soil microbial communities are crucial for maintaining environmental balance and supporting plant life.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus sabuli
Strainstrain DSM 46844

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus sabuli strain DSM 46844 genome assembly, contig:

Gene Summary

Adenine Count

717873 bp

Thymine Count

719543 bp

Guanine Count

2040587 bp

Cytosine Count

2040831 bp

Genome Length

5519188 bp

Protein-coding Genes

5211 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
signal transduction histidine kinaseSAMN06893097_104337Not AvailablePositive2538925 - 254074563895.7
response regulator receiver domain-containing proteinSAMN06893097_104338Not AvailableNegative2540566 - 254102415473.8
two component transcriptional regulator, luxr familySAMN06893097_104339Not AvailablePositive2541125 - 254179923519.3
diguanylate cyclase (ggdef) domain-containing proteinSAMN06893097_104340Not AvailablePositive2541948 - 254371762699.6
n-acetylglucosaminyl deacetylase, lmbe familySAMN06893097_104341Not AvailableNegative2544116 - 254493429348.9
dna-binding response regulator, narl/fixj family, contains rec and hth domainsSAMN06893097_104342Not AvailablePositive2545369 - 254616627471.1
radical sam superfamily enzyme, moaa/nifb/pqqe/skfb familySAMN06893097_104343Not AvailablePositive2546310 - 254738038885.7
hypothetical proteinSAMN06893097_104344Not AvailablePositive2547452 - 25475473455.17
atp-binding cassette, subfamily bSAMN06893097_104345Not AvailablePositive2547620 - 254940461621.9
atp-binding cassette, subfamily cSAMN06893097_104346Not AvailablePositive2549395 - 255110459792.0

Displaying genes 2441 – 2450 of 5264 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.