Geodermatophilus sabuli strain DSM 46844

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus sabuli strain DSM 46844 is a cocci-shaped bacterium that belongs to the genus Geodermatophilus. This strain is notable for possessing flagella, which are typically associated with motility in bacteria. G. sabuli has a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability in various environments. The strain is cataloged under the accession number OBDO00000000.1, which provides a reference for its genomic data. The presence of flagella suggests that G. sabuli has the capability for movement, which can be advantageous in its natural habitats, potentially allowing it to navigate through soil or other substrates. In terms of its ecological role, Geodermatophilus species are often found in terrestrial environments, particularly in arid or semi-arid regions, and are known to contribute to the degradation of organic matter. Given its characteristics, G. sabuli may play a significant role in soil health by participating in nutrient cycling and the breakdown of complex organic compounds. Overall, the traits of Geodermatophilus sabuli strain DSM 46844 highlight its potential importance in microbial ecology, particularly in ecosystems where soil microbial communities are crucial for maintaining environmental balance and supporting plant life.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus sabuli
Strainstrain DSM 46844

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus sabuli strain DSM 46844 genome assembly, contig:

Gene Summary

Adenine Count

717873 bp

Thymine Count

719543 bp

Guanine Count

2040587 bp

Cytosine Count

2040831 bp

Genome Length

5519188 bp

Protein-coding Genes

5211 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucose-6-phosphate isomeraseSAMN06893097_103122Not AvailablePositive1823018 - 182461654930.2
glucose-6-phosphate 1-dehydrogenaseSAMN06893097_103123Not AvailablePositive1824739 - 182625656464.0
glucose-6-phosphate dehydrogenase assembly protein opcaSAMN06893097_103124Not AvailablePositive1826309 - 182740638829.6
6-phosphogluconolactonaseSAMN06893097_103125Not AvailablePositive1827403 - 182821827826.8
hypothetical proteinSAMN06893097_103126Not AvailablePositive1828392 - 18285656231.58
rna polymerase-binding proteinSAMN06893097_103127Not AvailableNegative1828624 - 182896512166.3
preprotein translocase subunit secgSAMN06893097_103128Not AvailableNegative1829158 - 18293918003.34
peptide/nickel transport system substrate-binding proteinSAMN06893097_103129Not AvailableNegative1829483 - 183127361817.2
triosephosphate isomeraseSAMN06893097_103130Not AvailableNegative1831305 - 183215929095.7
phosphoglycerate kinaseSAMN06893097_103131Not AvailableNegative1832171 - 183336441253.3

Displaying genes 1771 – 1780 of 5264 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.