Xanthomarina sp.

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Xanthomarina

Description

Xanthomarina sp. is a bacterial species characterized by its single replicon, which is significant in understanding its genetic architecture. The genomic data for this organism can be accessed through the accession number NZNB00000000.1. While specific morphological, physiological, or ecological traits are not provided, the genus Xanthomarina is known to be associated with marine environments, suggesting that Xanthomarina sp. may also inhabit similar aquatic ecosystems. Members of this genus are often studied for their potential applications in biotechnology and their role in marine biogeochemical cycles. Understanding the genomic structure and organization of Xanthomarina sp., particularly its single replicon, can offer insights into its evolutionary adaptations. The presence of a single replicon may reflect a streamlined genomic organization, which could be advantageous in the competitive and dynamic marine environment. This trait may enable efficient replication and maintenance of essential genetic functions in varying conditions. In summary, Xanthomarina sp. is a genetically unique bacterium with a single replicon, and the genomic information available through its accession number can drive further research into its ecological roles and potential biotechnological applications in marine contexts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusXanthomarina
SpeciesXanthomarina sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Xanthomarina sp. isolate EAC95 146415, whole genome shotgun

Gene Summary

Adenine Count

962851 bp

Thymine Count

965792 bp

Guanine Count

525082 bp

Cytosine Count

529300 bp

Genome Length

2990433 bp

Protein-coding Genes

2648 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioredoxin family proteinCMP04_00400Not AvailableNegative96045 - 962788247.93
hypothetical proteinCMP04_00405Not AvailableNegative96489 - 9722027741.6
hypothetical proteinCMP04_00410Not AvailableNegative97186 - 9770719491.9
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdCMP04_00415Not AvailableNegative97784 - 9919353413.0
ornithine--oxo-acid transaminaseCMP04_00420Not AvailablePositive99545 - 10078945475.7
duf2752 domain-containing proteinCMP04_00425Not AvailableNegative100901 - 10130515581.7
hypothetical proteinCMP04_00430Not AvailableNegative101378 - 1015757158.88
hypothetical proteinCMP04_00435Not AvailableNegative101587 - 10192812550.8
duf2752 domain-containing proteinCMP04_00440Not AvailableNegative101945 - 10220810054.0
hypothetical proteinCMP04_00445Not AvailableNegative102271 - 10412468761.8

Displaying genes 81 – 90 of 2687 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.