Xanthomarina sp.

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Xanthomarina

Description

Xanthomarina sp. is a bacterial species characterized by its single replicon, which is significant in understanding its genetic architecture. The genomic data for this organism can be accessed through the accession number NZNB00000000.1. While specific morphological, physiological, or ecological traits are not provided, the genus Xanthomarina is known to be associated with marine environments, suggesting that Xanthomarina sp. may also inhabit similar aquatic ecosystems. Members of this genus are often studied for their potential applications in biotechnology and their role in marine biogeochemical cycles. Understanding the genomic structure and organization of Xanthomarina sp., particularly its single replicon, can offer insights into its evolutionary adaptations. The presence of a single replicon may reflect a streamlined genomic organization, which could be advantageous in the competitive and dynamic marine environment. This trait may enable efficient replication and maintenance of essential genetic functions in varying conditions. In summary, Xanthomarina sp. is a genetically unique bacterium with a single replicon, and the genomic information available through its accession number can drive further research into its ecological roles and potential biotechnological applications in marine contexts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusXanthomarina
SpeciesXanthomarina sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Xanthomarina sp. isolate EAC95 146415, whole genome shotgun

Gene Summary

Adenine Count

962851 bp

Thymine Count

965792 bp

Guanine Count

525082 bp

Cytosine Count

529300 bp

Genome Length

2990433 bp

Protein-coding Genes

2648 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c oxidase subunit iiCMP04_11970Not AvailablePositive2599771 - 260083840338.2
cytochrome c oxidase subunit iCMP04_11975Not AvailablePositive2600874 - 260266766611.3
holliday junction branch migration dna helicase ruvbCMP04_11980Not AvailablePositive2602740 - 260376237489.2
trna epoxyqueuosine(34) reductase quegCMP04_11985Not AvailablePositive2603800 - 260472335460.4
nadp-dependent malic enzymeCMP04_11990Not AvailablePositive2604796 - 260709984944.0
holliday junction branch migration protein ruvaCMP04_11995Not AvailablePositive2607157 - 260773821278.9
cell surface protein spraCMP04_12000Not AvailablePositive2607744 - 2614946271077.0
glycine cleavage system protein hCMP04_12005Not AvailablePositive2615009 - 261538913880.2
teicoplanin resistance protein vanzCMP04_12010Not AvailablePositive2615412 - 261576513396.6
energy transducer tonbCMP04_12015Not AvailablePositive2615823 - 261654226870.1

Displaying genes 2341 – 2350 of 2687 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.