Xanthomarina sp.

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Xanthomarina

Description

Xanthomarina sp. is a bacterial species characterized by its single replicon, which is significant in understanding its genetic architecture. The genomic data for this organism can be accessed through the accession number NZNB00000000.1. While specific morphological, physiological, or ecological traits are not provided, the genus Xanthomarina is known to be associated with marine environments, suggesting that Xanthomarina sp. may also inhabit similar aquatic ecosystems. Members of this genus are often studied for their potential applications in biotechnology and their role in marine biogeochemical cycles. Understanding the genomic structure and organization of Xanthomarina sp., particularly its single replicon, can offer insights into its evolutionary adaptations. The presence of a single replicon may reflect a streamlined genomic organization, which could be advantageous in the competitive and dynamic marine environment. This trait may enable efficient replication and maintenance of essential genetic functions in varying conditions. In summary, Xanthomarina sp. is a genetically unique bacterium with a single replicon, and the genomic information available through its accession number can drive further research into its ecological roles and potential biotechnological applications in marine contexts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusXanthomarina
SpeciesXanthomarina sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Xanthomarina sp. isolate EAC95 146415, whole genome shotgun

Gene Summary

Adenine Count

962851 bp

Thymine Count

965792 bp

Guanine Count

525082 bp

Cytosine Count

529300 bp

Genome Length

2990433 bp

Protein-coding Genes

2648 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
(d)cmp kinaseCMP04_00605Not AvailablePositive133335 - 13401825813.7
30s ribosomal protein s1CMP04_00610Not AvailablePositive134254 - 13608668196.8
hypothetical proteinCMP04_00615Not AvailablePositive136506 - 13685313714.5
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferaseCMP04_00620Not AvailablePositive136911 - 13745020805.2
aspartate carbamoyltransferaseCMP04_00625Not AvailablePositive137549 - 13847833866.3
ribonuclease zCMP04_00630Not AvailablePositive138483 - 13881512558.1
ribonuclease zCMP04_00635Not AvailablePositive138895 - 13980034298.3
hypothetical proteinCMP04_00640Not AvailableNegative139797 - 14021015986.0
pyridoxamine 5'-phosphate oxidaseCMP04_00645Not AvailablePositive140294 - 14094124999.7
hypothetical proteinCMP04_00650Not AvailablePositive141134 - 14160117512.4

Displaying genes 121 – 130 of 2687 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.