Algoriphagus sp.

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus sp. is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The type strain of Algoriphagus sp. is cataloged under the accession number NZML00000000.1, which provides a reference for further genomic and taxonomic studies. The genus Algoriphagus is often associated with cold environments, suggesting a potential adaptation to psychrophilic conditions. Such adaptations may involve specific metabolic pathways that allow Algoriphagus sp. to thrive in nutrient-poor and low-temperature habitats, common in marine ecosystems. The ecological role of Algoriphagus sp. may involve organic matter degradation, contributing to nutrient cycling in its environment. Understanding the traits of Algoriphagus sp. can provide insights into its ecological niche and potential applications in biotechnology, particularly in bioremediation or cold-active bioprocesses. Further research into its metabolic capabilities and interactions with other microorganisms could enhance our knowledge of microbial ecology in cold environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Algoriphagus sp. isolate IN13 MHASMcontig_377536, whole

Gene Summary

Adenine Count

1483874 bp

Thymine Count

1468434 bp

Guanine Count

959931 bp

Cytosine Count

965226 bp

Genome Length

4878159 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCL554_00865Not AvailableNegative182529 - 18282211992.3
hypothetical proteinCL554_00870Not AvailableNegative182828 - 18371835501.7
type ii restriction endonucleaseCL554_00875Not AvailableNegative183715 - 187572148560.0
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeCL554_00880Not AvailableNegative187758 - 18914051028.1
protein-disulfide isomeraseCL554_00885Not AvailableNegative189137 - 18959217779.7
iron abc transporterCL554_00890Not AvailableNegative189603 - 19049932161.7
zinc abc transporter permeaseCL554_00895Not AvailableNegative190489 - 19178147955.4
manganese abc transporter atp-binding proteinCL554_00900Not AvailableNegative191783 - 19257129227.7
metal ion abc transporter substrate-binding proteinCL554_00905Not AvailableNegative192568 - 19348233755.8
metal-dependent transcriptional regulatorCL554_00910Not AvailableNegative193479 - 19414125024.0

Displaying genes 221 – 230 of 4319 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.