Algoriphagus sp.

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus sp. is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The type strain of Algoriphagus sp. is cataloged under the accession number NZML00000000.1, which provides a reference for further genomic and taxonomic studies. The genus Algoriphagus is often associated with cold environments, suggesting a potential adaptation to psychrophilic conditions. Such adaptations may involve specific metabolic pathways that allow Algoriphagus sp. to thrive in nutrient-poor and low-temperature habitats, common in marine ecosystems. The ecological role of Algoriphagus sp. may involve organic matter degradation, contributing to nutrient cycling in its environment. Understanding the traits of Algoriphagus sp. can provide insights into its ecological niche and potential applications in biotechnology, particularly in bioremediation or cold-active bioprocesses. Further research into its metabolic capabilities and interactions with other microorganisms could enhance our knowledge of microbial ecology in cold environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Algoriphagus sp. isolate IN13 MHASMcontig_377536, whole

Gene Summary

Adenine Count

1483874 bp

Thymine Count

1468434 bp

Guanine Count

959931 bp

Cytosine Count

965226 bp

Genome Length

4878159 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional repressorCL554_10305Not AvailableNegative2261518 - 226198518279.8
rela/spot family proteinCL554_10310Not AvailableNegative2262039 - 226425884918.1
Trna-leuNot AvailableNot AvailablePositive2264419 - 2264500Not Available
trigger factorCL554_10320Not AvailablePositive2264594 - 226592250683.0
atp-dependent clp protease proteolytic subunitCL554_10325Not AvailablePositive2265997 - 226666524858.0
atp-dependent clp protease atp-binding subunit clpxCL554_10330Not AvailablePositive2266670 - 226789645404.0
deoxyribonuclease hsdrCL554_10335Not AvailableNegative2267968 - 226947053359.8
heat-shock protein hsp20CL554_10340Not AvailableNegative2269631 - 227005916314.4
cold-shock proteinCL554_10345Not AvailableNegative2270284 - 22704756884.09
histidine phosphatase family proteinCL554_10350Not AvailablePositive2270565 - 227106218846.1

Displaying genes 2061 – 2070 of 4319 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.