Pseudomonas syringae strain CFBP 2116

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae strain CFBP 2116 is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. This strain is classified as a heterotrophic aerobe, meaning it requires organic compounds for energy and thrives in the presence of oxygen. It is mesophilic, indicating that it grows optimally at moderate temperatures. CFBP 2116 is characterized by a free-living biotic relationship, allowing it to inhabit various environments. Its adaptability is reflected in its diverse range of hosts, which includes Homo sapiens, various Metazoa, and multiple plant species such as Solanum lycopersicum (tomato), Oryza sativa (rice), and Arabidopsis thaliana. This broad host range underscores its ecological versatility and potential impact on both human health and agriculture. The strain is known to cause various plant diseases, including blight, chlorosis, necrosis, bacterial canker, and foliar necroses and cankers. These health effects are particularly significant in crops, where Pseudomonas syringae can lead to substantial agricultural losses. The presence of three replicons and two membranes further supports its complex genetic structure, which may contribute to its pathogenicity. In summary, Pseudomonas syringae strain CFBP 2116 exemplifies a significant plant pathogen with a wide host range and various health effects on plants. Its ability to thrive in multiple habitats and its pathogenic potential highlights the importance of monitoring this bacterium in agricultural contexts to mitigate its impact on crop health and yield.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
Strainstrain CFBP 2116

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae strain CFBP 2116
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityPlant

Genome Summary

Pseudomonas syringae strain CFBP 2116 plasmid PP4, complete

Gene Summary

Adenine Count

18289 bp

Thymine Count

18271 bp

Guanine Count

23324 bp

Cytosine Count

22961 bp

Genome Length

82845 bp

Protein-coding Genes

100 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDTQ61_RS25810Not AvailableNegative5363345 - 536377316349.7
pantothenate kinaseDTQ61_RS25815Not AvailableNegative5363781 - 536453026599.1
bifunctional biotin--[acetyl-coa-carboxylase] ligase/biotin operon repressor biraDTQ61_RS25820Not AvailableNegative5364520 - 536547934388.7
5s ribosomal rnaNot AvailableNot AvailablePositive5365625 - 5365740Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive5365901 - 5368793Not Available
Trna-alaNot AvailableNot AvailablePositive5369033 - 5369108Not Available
Trna-ileNot AvailableNot AvailablePositive5369164 - 5369240Not Available
16s ribosomal rnaNot AvailableNot AvailablePositive5369324 - 5370862Not Available
tyrosine--trna ligaseDTQ61_RS25855Not AvailableNegative5371369 - 537258044534.7
peptidoglycan dd-metalloendopeptidase family proteinDTQ61_RS25865Not AvailablePositive5372782 - 537420051428.9

Displaying genes 5021 – 5030 of 5694 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
ChlorosisCausesPMC3202874
NecrosisCausesPMC3202874
Foliar necroses and cankersCausesPMC6638699
Bacterial cankerCausesPMC8815115
BlightCausesPMC12030312
Plant diseasesCausesPMC3029378
Bacterial cankerCausesPMC4803819
Cherry cankerCausesPMC9305585

Displaying health effects 1 – 8 of 8 in total