Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain CFBP 2116 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Genome Summary
Pseudomonas syringae strain CFBP 2116 plasmid PP4, complete
Gene Summary
Adenine Count
18289 bp
Thymine Count
18271 bp
Guanine Count
23324 bp
Cytosine Count
22961 bp
Genome Length
82845 bp
Protein-coding Genes
100 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti sigma-e factor rsea c-terminal domain-containing protein | DTQ61_RS22670 | Not Available | Negative | 4724185 - 4724775 | 20785.6 |
| rna polymerase sigma factor rpoe | DTQ61_RS22675 | Not Available | Negative | 4724809 - 4725390 | 22252.3 |
| l-aspartate oxidase | DTQ61_RS22680 | Not Available | Positive | 4725888 - 4727504 | 59664.7 |
| protein ygfx | DTQ61_RS22685 | Not Available | Negative | 4727473 - 4727937 | 17494.7 |
| succinate dehydrogenase assembly factor 2 | DTQ61_RS22690 | Not Available | Negative | 4727921 - 4728175 | 10328.5 |
| ygfz/gcvt domain-containing protein | DTQ61_RS22695 | Not Available | Positive | 4728329 - 4729270 | 33880.6 |
| hdod domain-containing protein | DTQ61_RS22700 | Not Available | Positive | 4729385 - 4730206 | 30499.1 |
| sensor histidine kinase | DTQ61_RS22705 | Not Available | Negative | 4730209 - 4731591 | 50593.9 |
| response regulator | DTQ61_RS22710 | Not Available | Negative | 4731584 - 4732255 | 24584.8 |
| bug family tripartite tricarboxylate transporter substrate binding protein | DTQ61_RS22720 | Not Available | Positive | 4732736 - 4733716 | 35038.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









