Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain CFBP 2116 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Genome Summary
Pseudomonas syringae strain CFBP 2116 plasmid PP4, complete
Gene Summary
Adenine Count
18289 bp
Thymine Count
18271 bp
Guanine Count
23324 bp
Cytosine Count
22961 bp
Genome Length
82845 bp
Protein-coding Genes
100 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| four-carbon acid sugar kinase family protein | DTQ61_RS19695 | Not Available | Positive | 4128777 - 4130036 | 44789.4 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DTQ61_RS19700 | Not Available | Positive | 4130029 - 4131063 | 36863.8 |
| sodium:solute symporter family protein | DTQ61_RS19705 | Not Available | Positive | 4131142 - 4132557 | 50627.0 |
| sialidase family protein | DTQ61_RS19710 | Not Available | Positive | 4132544 - 4133668 | 41554.5 |
| sdr family nad(p)-dependent oxidoreductase | DTQ61_RS19715 | Not Available | Positive | 4133723 - 4134409 | 23903.1 |
| deor/glpr family dna-binding transcription regulator | DTQ61_RS19720 | Not Available | Positive | 4134449 - 4135219 | 27699.3 |
| toxin vasx | DTQ61_RS19725 | Not Available | Positive | 4135512 - 4138910 | 126471.0 |
| transposase domain-containing protein | DTQ61_RS19730 | Not Available | Positive | 4138907 - 4139600 | 26147.5 |
| atp-binding protein | DTQ61_RS19735 | Not Available | Negative | 4139648 - 4141885 | 82257.7 |
| biliverdin-producing heme oxygenase | DTQ61_RS19740 | Not Available | Negative | 4141882 - 4142496 | 22561.2 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









