Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain CFBP 2116 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Genome Summary
Pseudomonas syringae strain CFBP 2116 plasmid PP4, complete
Gene Summary
Adenine Count
18289 bp
Thymine Count
18271 bp
Guanine Count
23324 bp
Cytosine Count
22961 bp
Genome Length
82845 bp
Protein-coding Genes
100 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate/nitrite transporter | DTQ61_RS12045 | Not Available | Negative | 2516136 - 2517347 | 42480.7 |
| transposase domain-containing protein | DTQ61_RS12055 | Not Available | Positive | 2518247 - 2519483 | 44630.0 |
| antar domain-containing response regulator | DTQ61_RS12060 | Not Available | Negative | 2519547 - 2520122 | 21530.5 |
| cmpa/nrta family abc transporter substrate-binding protein | DTQ61_RS12065 | Not Available | Negative | 2520137 - 2521348 | 44068.9 |
| quinone-dependent dihydroorotate dehydrogenase | DTQ61_RS12070 | Not Available | Positive | 2521600 - 2522631 | 36255.1 |
| ribosome modulation factor | DTQ61_RS12075 | Not Available | Negative | 2522770 - 2522985 | 8192.81 |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | DTQ61_RS12080 | Not Available | Positive | 2523576 - 2525828 | 84680.2 |
| diguanylate cyclase | DTQ61_RS12085 | Not Available | Positive | 2525969 - 2528359 | 89036.2 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | DTQ61_RS12090 | Not Available | Negative | 2528412 - 2529878 | 53036.1 |
| yggl family protein | DTQ61_RS12095 | Not Available | Positive | 2530209 - 2530553 | 12843.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









