Pseudomonas syringae strain CFBP 2116

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae strain CFBP 2116 is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. This strain is classified as a heterotrophic aerobe, meaning it requires organic compounds for energy and thrives in the presence of oxygen. It is mesophilic, indicating that it grows optimally at moderate temperatures. CFBP 2116 is characterized by a free-living biotic relationship, allowing it to inhabit various environments. Its adaptability is reflected in its diverse range of hosts, which includes Homo sapiens, various Metazoa, and multiple plant species such as Solanum lycopersicum (tomato), Oryza sativa (rice), and Arabidopsis thaliana. This broad host range underscores its ecological versatility and potential impact on both human health and agriculture. The strain is known to cause various plant diseases, including blight, chlorosis, necrosis, bacterial canker, and foliar necroses and cankers. These health effects are particularly significant in crops, where Pseudomonas syringae can lead to substantial agricultural losses. The presence of three replicons and two membranes further supports its complex genetic structure, which may contribute to its pathogenicity. In summary, Pseudomonas syringae strain CFBP 2116 exemplifies a significant plant pathogen with a wide host range and various health effects on plants. Its ability to thrive in multiple habitats and its pathogenic potential highlights the importance of monitoring this bacterium in agricultural contexts to mitigate its impact on crop health and yield.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
Strainstrain CFBP 2116

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae strain CFBP 2116
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityPlant

Genome Summary

Pseudomonas syringae strain CFBP 2116 plasmid PP4, complete

Gene Summary

Adenine Count

18289 bp

Thymine Count

18271 bp

Guanine Count

23324 bp

Cytosine Count

22961 bp

Genome Length

82845 bp

Protein-coding Genes

100 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome recycling factorDTQ61_RS08395Not AvailablePositive1718096 - 171865320497.6
polyprenyl diphosphate synthaseDTQ61_RS08400Not AvailablePositive1718670 - 171942528123.7
phosphatidate cytidylyltransferaseDTQ61_RS08405Not AvailablePositive1719425 - 172024029062.5
1-deoxy-d-xylulose-5-phosphate reductoisomeraseDTQ61_RS08410Not AvailablePositive1720237 - 172142742287.2
sigma e protease regulator rsepDTQ61_RS08415Not AvailablePositive1721545 - 172289748441.3
outer membrane protein assembly factor bamaDTQ61_RS08420Not AvailablePositive1722972 - 172534787027.0
omph family outer membrane proteinDTQ61_RS08425Not AvailablePositive1725393 - 172589618900.1
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseDTQ61_RS08430Not AvailablePositive1725899 - 172695436682.0
3-hydroxyacyl-acp dehydratase fabzDTQ61_RS08435Not AvailablePositive1727064 - 172750416722.5
acyl-acp--udp-n-acetylglucosamine o-acyltransferaseDTQ61_RS08440Not AvailablePositive1727501 - 172827727912.4

Displaying genes 1811 – 1820 of 5694 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
ChlorosisCausesPMC3202874
NecrosisCausesPMC3202874
Foliar necroses and cankersCausesPMC6638699
Bacterial cankerCausesPMC8815115
BlightCausesPMC12030312
Plant diseasesCausesPMC3029378
Bacterial cankerCausesPMC4803819
Cherry cankerCausesPMC9305585

Displaying health effects 1 – 8 of 8 in total