Candidatus Nitrosocaldus cavascurensis strain SCU2

Kingdom

Thermoproteati

Phylum

Nitrososphaerota

Class

Nitrososphaeria

Order

Candidatus Nitrosocaldales

Family

Candidatus Nitrosocaldaceae

Genus

Candidatus Nitrosocaldus

Description

Candidatus Nitrosocaldus cavascurensis strain SCU2 is a notable microorganism characterized by having a single replicon, which is indicative of its genomic structure. The accession number for this strain is NZ_LT981265.1, providing a reference for further genetic and taxonomic studies. This strain is part of the Nitrosocaldus genus, which is known for its role in nitrification processes, particularly in extreme environments. The ability of Candidatus Nitrosocaldus cavascurensis to thrive under specific conditions may reflect its adaptation to unique ecological niches, potentially contributing to nitrogen cycling in its habitat. Given its single replicon structure, Candidatus Nitrosocaldus cavascurensis strain SCU2 may exhibit streamlined genomic features that could facilitate efficient metabolic processes. Understanding the genomic characteristics and ecological roles of this strain could provide insights into its function within microbial communities, especially in relation to nitrogen transformation in terrestrial and aquatic systems. The ecological significance of Candidatus Nitrosocaldus cavascurensis strain SCU2 lies in its potential contributions to biogeochemical cycles. By participating in nitrification, this strain may play a critical role in maintaining soil fertility and influencing nutrient availability, which are essential for the health of ecosystems. Further studies on this strain could elucidate its interactions within microbial communities and its impact on environmental processes.

Taxonomy

KingdomThermoproteati
PhylumNitrososphaerota
ClassNitrososphaeria
OrderCandidatus Nitrosocaldales
FamilyCandidatus Nitrosocaldaceae
GenusCandidatus Nitrosocaldus
SpeciesCandidatus Nitrosocaldus cavascurensis
Strainstrain SCU2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Nitrosocaldus cavascurensis strain SCU2


Gene Summary

Adenine Count

459655 bp

Thymine Count

461164 bp

Guanine Count

326187 bp

Cytosine Count

330278 bp

Genome Length

1577284 bp

Protein-coding Genes

1674 genes

Non-Coding Genes

34 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
archaeal heat shock protein hsp20NCAV_RS00200Not AvailableNegative35629 - 3621622883.5
j domain-containing proteinNCAV_RS08725Not AvailableNegative36421 - 3758143687.2
molecular chaperone dnakNCAV_RS00210Not AvailableNegative37644 - 3947366155.0
nucleotide exchange factor grpeNCAV_RS00215Not AvailableNegative39470 - 4003621095.0
hypothetical proteinNCAV_RS00220Not AvailableNegative40081 - 4122942725.9
transcription factorNCAV_RS00230Not AvailablePositive42263 - 4278420018.0
2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate reductaseNCAV_RS00235Not AvailableNegative42841 - 4353025225.2
amidohydrolase family proteinNCAV_RS00240Not AvailableNegative43537 - 4480847072.9
gtp cyclohydrolase iiaNCAV_RS00245Not AvailableNegative44799 - 4561130199.5
6,7-dimethyl-8-ribityllumazine synthaseNCAV_RS00250Not AvailableNegative45638 - 4617719271.3

Displaying genes 41 – 50 of 1708 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.