Pseudodesulfovibrio profundus strain 500-1

curved/spiral

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Pseudodesulfovibrio

Description

Pseudodesulfovibrio profundus strain 500-1 is a Gram-negative, curved or spiral-shaped bacterium. This strain has been cataloged under the accession number NZ_LT907977.1 and is characterized by having a single replicon, indicating a streamlined genomic architecture that may influence its replication and metabolic processes. The classification as a Gram-negative organism suggests that Pseudodesulfovibrio profundus strain 500-1 possesses a thin peptidoglycan layer surrounded by an outer membrane, which is typical of this group. Such structural features often contribute to the organism's resistance to certain antibiotics and can affect its interactions with the surrounding environment. In ecological terms, members of the genus Pseudodesulfovibrio are known to inhabit anaerobic environments, often associated with sulfur cycling. The curved or spiral morphology may optimize motility in such environments, potentially allowing the organism to effectively navigate through microenvironments in sediment or biofilms. This characteristic could play a crucial role in its ecological niche, particularly in biogeochemical processes involving sulfur compounds. Overall, the traits of Pseudodesulfovibrio profundus strain 500-1 highlight its adaptation to specific environmental conditions and suggest its potential role in sulfur cycling in anaerobic ecosystems. Understanding such microorganisms contributes to a broader comprehension of microbial ecology and the biochemical processes they mediate in their habitats.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusPseudodesulfovibrio
SpeciesPseudodesulfovibrio profundus
Strainstrain 500-1

Profile

Physiology
Gram staining propertiesGram-negative
Shapecurved/spiral
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudodesulfovibrio profundus strain 500-1


Gene Summary

Adenine Count

1809 bp

Thymine Count

1530 bp

Guanine Count

1479 bp

Cytosine Count

1349 bp

Genome Length

6167 bp

Protein-coding Genes

6 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dnab-like helicase n-terminal domain-containing proteinDPRO_RS19845Not AvailableNegative323 - 5839533.55
replication initiation proteinDPRO_RS19850Not AvailableNegative584 - 159139336.6
class i sam-dependent methyltransferaseDPRO_RS19855Not AvailablePositive2142 - 301434703.1
class i sam-dependent methyltransferaseDPRO_RS19860Not AvailableNegative3112 - 383127226.9
conjugal transfer protein tradDPRO_RS19865Not AvailableNegative3864 - 425314588.7
mobq family relaxaseDPRO_RS19870Not AvailablePositive4458 - 615866470.9

Displaying genes 1 – 6 of 6 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.