Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas fragariae |
| Strain | strain PD5205 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Fragaria x ananassa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799566 bp
Thymine Count
796260 bp
Guanine Count
1318411 bp
Cytosine Count
1318407 bp
Genome Length
4232644 bp
Protein-coding Genes
3796 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PD5205_RS13310 | Not Available | Positive | 2838390 - 2838662 | 9840.57 |
| cest family type iii secretion system chaperone | PD5205_RS13315 | Not Available | Positive | 2838733 - 2839203 | 17648.1 |
| pectate lyase | PD5205_RS13320 | Not Available | Positive | 2839466 - 2840485 | 34794.9 |
| xopz family type iii secretion system effector | PD5205_RS13325 | Not Available | Positive | 2840743 - 2844705 | 142917.0 |
| type iii secretion system effector xopf1 | PD5205_RS13330 | Not Available | Negative | 2844813 - 2846858 | 72899.2 |
| hpa3 family type iii secretion system protein | PD5205_RS13335 | Not Available | Negative | 2846858 - 2847301 | 15494.0 |
| glycerophosphodiester phosphodiesterase family protein | PD5205_RS13340 | Not Available | Positive | 2847656 - 2848103 | 17378.1 |
| duf378 domain-containing protein | PD5205_RS13345 | Not Available | Positive | 2848287 - 2848529 | 8716.74 |
| peptidylprolyl isomerase | PD5205_RS13350 | Not Available | Positive | 2848667 - 2849572 | 33145.3 |
| Ncrna_class:other | Not Available | Not Available | Positive | 2849681 - 2849756 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
